Microarray Probes on PGSC0003DMT400036091
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24414_PI426222305 |
JHI_St_60k_v1 |
GGTTGCAGAACCAAAACAAAATCATAGCTAAACATAGGGCTTGATTTATATACGTGTGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400036091
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400036091 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G05020.1 |
+1 |
3e-175 |
524 |
359/754 (48%) |
ENTH/ANTH/VHS superfamily protein | chr1:1435384-1437345 REVERSE LENGTH=653 |
Transcript Sequence (2504 bp)
>PGSC0003DMT400036091 2504 pgsc_dm_v3.4
CTTGAATCCAAAAAAAATAAAAAATATTACATTTTTACAATCTATTTTTTTCAAGATTTC
AAGAAGTTAACAATCCTAGTGCCTCCAAATCTTGTGTTTTATTCTGTTTGTTGATCATAA
TCGCGTTTTTTTTTAGTCGCGAATGTGATCATTTTGGTGTTTGAATCAAGAAAACCACAC
GTTGAATCGAAGTTTTGAAAAAAGAGAAGGTAAATAATGCCAAGCAAGTTAAAGAAAGCA
ATTGGTGCAGTAAAAGATCAAACAAGCATTAGCCTTGCAAAAGTTTCAAGCAATACTTCT
TCAACTCTTGAAGTTGCTGTCTTAAAAGCCACAACACATGATGATGTACCTATCGATGAT
CGATACGTTCAAGAAGTCATCAAACTTGTCTCATCAAACAAGGCCTACGCGGCTGCCTGT
GCTCGTGCCATTGGCAAACGCATAGGCAGAACGAGGAACTGGATCGTTGCCCTCAAATCA
TTGATGCTTGTCTTAAGAATCTTCCAAGATGGTGATCCTTACTTCCCTCGAGAGATCCTT
CATGCTATGAAACGTGGAGCCAAGATTCTTAATCTTTCTAGTTTTCGCGATGATTCAAAT
TCTAGTCCTTGGGATTTCACAGCATTTGTTCGTACATTTGCTTTGTATCTTGATGAACGT
CTGGATTGTTTCCTTACTGGAAAGCTTCAAAGAAGATACAATAATCGCGAAAGAGAGAAT
TCAAGTAGCCATATTTATAGGTCTACTGGTAGTAGTCGAAGAAGGGGTGATGAACCTGTT
CGTGACATGAAACCAGTAATGCTGCTTGACAAGATATCGTATTGGCAACGATTGATTGAA
AGAGCAATAGCTACAAGACCAACAGGAGCAGCTAAGACAAATCGTCTTGTCCAAATCGCG
TTGTATGCTGTTGTAACAGAGAGTTTTGATCTTTACAAAGATATCTCAGATGGTCTTGCA
CTTGTTCTTGATAGCTTCTTCCATTTACCATATCAATCATGCGTAAACGCCTTCCAAACT
TGTGTCAAAGCTGCTAAACAATTCGAGGAGATCAGTGCGTTTTACTCTGTCTGTAAAACT
ATAGGCGTTGGCAGGACATCAGAATATCCAAGTGTGCAAACAATCTCAGAGGAATTGATC
GAAACGTTGCAAGAGTTCCTCAAGGATCAATCTTCATTTCCAGCTCATACACAAAGCAAA
CCACATTTGCTTCTTCCAGGCACCGGTGGTGGTTCCTCAAGGACCACGAGCAGCAAACGT
GATAGTTATGGTTGTCAATCAGACTTTTCTGTGACCACAGGCACGACTGAGCCATACTCG
GAGAAGAGTACTAATACTTGTGTTGATTCGCGTTGCACATCATTAGAAGATCTAATAAGT
GCAACAGAAACATGGAAGAGTCCAGCTAATATTTCAATTGATTTGGAGGCCTATTCAGAT
ATTCAATTTGAGAAGCAGTTGCATGAAAAGGATGACTCGGGGTCTACTCATTCGTTGCCC
GTATCAAACTCCATGGCTGATCTTGTATCCTTACCAGATTTGCAAGAATATGATGAAGAC
GACGAGAAAAAACAAGAAGCTGAACTTGAACAACACCAGAAACAGAATCCATCATTAGAT
TCTACTAGTTCAGCTAAAGGATGGGAACTCGTGTTAACTGAGGCGATCCCATCAACATCC
TTCAACGCGTTCCCTGAGCAACCAAAACCGGATCATTTGTCAAGAAACGAAATGAGAGGG
GTAATAACACCATCAGCATCATTCAACGCGTTCCCTGAACAAGGACAAGAAAATGTACCT
ACAAATGAAGCAGAGGTTTCTTCAAGCAATGGATGGGAACTCGTACTATTCGAAAACATT
CCACAAGCACAATCAACACAACCCGTTGTCCCTAGTACCACGAACAACAACAATGTTAAC
AGCTTCAGTTTCGCCACTTTGGATGACTTGTACAATCAGAATCAAACGCCATTTTATCCG
AATAATAGCCAAAACTCACATTTCACCCCTAGTACAAACAACTTTTTGTATGATCAAACT
CCAGCACCTCAACACTACAATCCATTTTTACAAGACACATCAATGGAGTTGGCTATGGTA
CCGGTTACTGGTGCACCTGCCCCATACCCAACTCTGACCACGAATTCTTCGTTTTCATTT
CCAACGTCTACTGACATGTTCACATCATCAGCACCTACATTTCAAGCAACTCCAACTTTT
AGTGCTCAGAATCATACTACAGGGCCAATGCAGAGTACTAATATGGACGACCCGTTCGCG
ACATTTTCGAGTAGTGATCAGATGTTTAATGGCATCAAGAATGAGCAGAATTTGATGCAA
GAACAACAATTATGGTTGCAGAACCAAAACAAAATCATAGCTAAACATAGGGCTTGATTT
ATATACGTGTGTTAAATGAATAAATCTTCTTGTTATGTTTTACAAAATTGATTTTGTGTT
AATTCACCTCCCTTTCATTACATTAATTGCATGCTTTTTCGATC
