Microarray Probes on PGSC0003DMT400036021
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15933_PI426222305 |
JHI_St_60k_v1 |
CTTGGGTATTGGCCTTAATTCTTCATCAACATCAGATAATAATTGGAGTCATACCTTGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400036021
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400036021 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G61660.1 |
+1 |
5e-63 |
216 |
170/460 (37%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:22754003-22756171 REVERSE LENGTH=393 |
Transcript Sequence (1891 bp)
>PGSC0003DMT400036021 1891 pgsc_dm_v3.4
CTTCTTTCTTTTTACAATGTCAACCAGATTCCGGTAGTTTCTCCTCCCCACCCCTACCCC
TATATATATATATATAAATACAACTCTCAGTTCATAAATTCAGTTTCATGTAATACAAAA
CACACAAGTACTATTACGACTACTCGAGCTTTATTGAAGGAGAAGAAGAAGTATAGTTTT
AATTATTTACGAGTGAATAAAAACAAATAAGTTATGGGTGATGAATATCAAGCAAGTGTT
TGTGGAGGAAACTGGTGGAATTCAAGTAGAAGTATATTTGGTTCATCACTATGTGCATCT
TCAGTTCCTTTAGGGAACTCTAATTTTGCATGGACAAATGATCATTTGTTGGATATGAAA
TCTTCCTGTAGGTCTAACGATGAATCTGGTAATTCTGATGAATCTGTTGTTCTTCAAGAA
TTACCTAAACATGATTCCACTCTACAAATCTTGGGTATTGGCCTTAATTCTTCATCAACA
TCAGATAATAATTGGAGTCATACCTTGATGCATGGAAATGATAGGAGTGAAAGTAGTTAT
CCTTCAATACTACAGGAAGACCTAAATTCAAGCATGAATTACCAACAAGAAAGTGGGGTT
GATTGTTCAAGCAACTCATTTAAACAAGATTTCACTTTAGGAATGAATCATCCAATCACT
AGCTCAACTAATACTCATCATCATGATCAAACCTTTCCAATGAATTCATCTTTCCCTAAT
TATCCTTCAGCTTTACTTCAAACTTTATTTGATAATGATCCTCCTCCTCCTCCTCCTCAA
CAACAACAACAACAATTACAACAATCTTTGTTTGCTACTAATAACAACCAACCAATGAAT
TTCCCAACATCATCCTTAAACTACAGGCCAGATTTGAATGACTTTTCACCTTCTATGTCT
AAATTCCGTAATTCCTTGTTGATACCAAAACAAAGTACACCTTCTGATCATTTTCCAAAT
TACTCTCTTAATGTTACCACTTCTCTCTACAATACTTCATCAGCCACATCCTTAAACAAT
ATGCGCGGTACTCTTATGCCTTGTATGCATCCACAAATTCTCCAGTCACCATCATTTAAC
GAGAATTCCAGAGCTCCTAACGTTACTCCAAAGTGTAAAGTTGAAGATTTAAGAGAATCG
AGGGTGACTAAGAAAAGTGTGAATAATGAAGCAACATTGAAGAGGGCAAGAATAGAGACA
CCATCACCATTGCCAACTTTTAAGGTCAGAAAAGAGAAATTGGGGGACCGTATTACTGCT
CTCCAGCAATTGGTTTCACCTTTCGGAAAGACTGATACAGCTTCAGTTCTCCATGAAGCT
ATTGAGTACATCAAGTTTCTCCATGATCAAGTCAATGCTCTTAGTACTCCTTATTTGAAA
AATGGATCAAGCACTCAACACCAACAGATTGTTGATAAGGTTAAGGAAGAAGATTTGAGG
AGCCGAGGATTGTGCCTGGTACCGATATCGAGTACTTTTCCAGTAGCAACTGAAACTAGT
ACAGATTTTTGGACTCCAAATTTTGGTGGTACGTTCAGATAGAGAGGCTTGAGACGAAGT
GATTTATTTTTTACGTACTAAAAGGGAAAGTGAGTATTGACAGCCAATGCTAGCTGGGCC
ATATCTACAGGCAGAATGATGTGTTGGTAGGCTAAGTACATGATTATAGAGAAGATTAAG
TGTAGAGCTGTAATGACATTAATTAATTAATAATCGGCTTGGATTAGGAACAGGAACAAG
TGCTAAATTTAGCTAAGACTACTTTATTTTAACATTTGTGTTTATGTTTTATGTAACTTG
TTGTTTTGTTGCTCTTGGATTGGCTGAATTTAGCACATCATAAGGAACTTTTTGTTCCTG
TTTCTAAATATTTATATATTTAAAATGTTCG
