Microarray Probes on PGSC0003DMT400035510
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44202_PI426222305 |
JHI_St_60k_v1 |
GCAACCTCACCCAAGGTAATGAATTGAAGTATCATTAAAGGCAAATCTAAAACGATGTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400035510
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400035510 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G65980.1 |
+1 |
3e-135 |
412 |
216/427 (51%) |
Auxin efflux carrier family protein | chr5:26392444-26394232 FORWARD LENGTH=395 |
Transcript Sequence (2594 bp)
>PGSC0003DMT400035510 2594 pgsc_dm_v3.4
TCACTTTTTAAAAAAATTAATCGAACACTAATGATTATCTTGTCCAAGTACGCTATAAGC
CTTTCTGAGATAAAGAAACATTTAAGCTTTAATTAAAGCTTAGTATGCCGCAAATCCATT
CATTAATTGATAAATATTTAGCCCAAAAACTCATACTATTATTTTTTATATACGTAGTGA
ATTCTAATTTTCTCATGATTGGATGGGTGTAAAGTATCTTTAGCAACGCCATTGCTGATG
TAAAGTAACAGAATTGCTATTAATAGAAGTGTATCACCTGCCCCTTAGTCGTTTTCTGTC
ACGTTAGTACCACCCGTACTATATATATAGAGAGAGACATGTTTCTATTGCTGACACATG
TATTTGAACTTAACTTGACTAAGAATAACAGCAGAAAAATGTAAACTTAGAAATGTTCAA
ATTTGTTTTTTCACCGAGGGGTGGATCGAAGCAATTGCAGTGAAGAATTGATCTGAAACG
AAGTTTGGATGGTGATTATGTGAAAACATGAGTCCATGTCATGTCAAGGAACTGTTGTTT
CCTTGGTCTTTCCTATGCTTACATAAACAAATGTCACGCCCATAGGCCCATGTAACAATA
ACGATAATGTACAGAGTACGACTGGTTAGGGGGCATGGGTTTTGTCCAATTGGATGAAGT
TCATTCTCTCTTACTGGTCTTGATATTACACTATCGCGTTACTCATACCACAAGAAGGTA
GAGGTTGTTTCGAAACGAATGATGAAAAGGAGAAAGTATCATAAACAATGCACACATTAA
TTCTGTGCTTATTTATTTATATGTTCATGTATTCTTTTGTTTGTTTATTGGGGTTTAACC
ATTCCACGAATTAACATTTTTTATTTTTTTTTGGTTTGGGGATTGCAGGATATATAGACA
GAGACAGAGTTTATTAAAAGAAAAAAAAGACATTTTTGAAACTCCATAGTTAGGCATTAC
AACTAGCAAATAATATATATTTTTGTATCTACAAAATTTTGCAAAAAGAAAAAAGAAAAC
ATGGGTTTTATGACATTATTAGAAGTGGCATCAATGCCAATATTGCAAGTGCTAATAGTA
AGTGGTTTAGGAGCTGTAATGGCCACTGATTATCTTAAGCTGCTTCCTGCTGATGCCCGC
AAATACCTTAACAGAATTGTGTTTGTGGTATTTACACCGGCCCTGATGTTTGCGAGTTTG
GCCGAGTCTGTCACCTTTCAAGATATCATCACATGGTGGTTTATGCCAGTTAATGTTGGA
TTAACATTTCTATTTGGAGGGATTCTTGGATGGATAGCTATGAAAATATTGAAACCAAAG
CCACATCTTGAGGGACTCATTATTGCTACATGCTCATCAGGAAACTTGGGAAATCTTCTT
TTGATTGTCATTCCTGCAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACT
TGTGCTTCTGTTGGCCTTTCCTATGCATCTTTCTCAATGGCACTTGGAGGTTTCTACATT
TGGACATTCACTTATCAGCTAATAAGAAGTTCATCCTTGAAATTCAAAGCACTAAAAACA
GCAGAGGAGAACGAAGCGATTAAGGGACCAAACAATGACTCGGAGACAAATGAAAAGTCT
TACCTTCTTGACAACAATTCTCAAGATCAGCTTCCTATTAGTACCACAAAAACAACTGAA
AATCAAACAGTAGAAGTATCATCATGGCGAAAAATAGTAGGTGTGGTACACACTTTCTTA
GAAGAGCTAACAGCACCTCCAACACTTGGAGCTATTGTAGGATTCCTATTTGGTTCAGTT
ACATGGCTGAAAAATCTGGTGATTGGGGATGCTGCTCCCCTTAGAGTTATTCAAGACTCT
GTCAAGTTACTTGGGTATGTAGTACTAAATAAGACATTTACAATCGCGATCATGCTGCAT
CAACGAAAGGTTTACATGTTGTTTTCTTACATATCAGGGATGGAACCATTCCGTGCATCA
CTCTTATACTTGGAGGCAACCTCACCCAAGGTAATGAATTGAAGTATCATTAAAGGCAAA
TCTAAAACGATGTTTATATGTATACTCGTTCTGAACTCAGTGACTCTGGCAACTTTGACA
GGATTGAGGAAGGCACAAGTAAAACCATCAACTATAATAGCAGTAGTTTGCGTGCGATTC
ATCTTCAGTCCATTGATAGGAATTGGAATTGTTAAAACAGCAGCGAACTTAGGGTTCCTT
CCAGCAGATCCTCTGTACCATTTCGTGCTAATGCTTCAGTACACCGTCCCACCTGCTATG
AATATCAGTAAGTTATAACAATTTCATATCAACTGAATGCTGATGTTTATGGTTTGCTTA
TTGAAGATGATGATGAAATGCAGGTACAATGACACAATTAGTTGATGTAGCACAAGAGGA
GTGTTCTGTTCTAATCATGTGGACTTATTTGGTAGCAGCATTAGCACTCACCATTTGGTC
CACTGTATTTATGTGGCTCTTATCATGATAAATTACAAATCTTAGATACTGAAAGCAGTA
TTTTTAAAAATTCTTTTATGATTGCTTGTATACTGTTCTACATTCATTTATGAAAATATA
GAATCATTATTTCT
