Microarray Probes on PGSC0003DMT400035438
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_27668_PI426222305 |
JHI_St_60k_v1 |
AGATTGTATCTACACTACCATATCTCCCTCTTCACACCCTTATTAAGATGGAGCATCAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400035438
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400035438 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G24020.1 |
+1 |
1e-38 |
155 |
119/379 (31%) |
NIN like protein 7 | chr4:12479904-12483822 FORWARD LENGTH=959 |
Transcript Sequence (2442 bp)
>PGSC0003DMT400035438 2442 pgsc_dm_v3.4
ATGGAGCATCAACCTTCAGAGGTATGTGACCTAATGCCTTGTAAACTGGACTGGTGTCAA
CTGAAGTTAAATGGCTGGGTATTTTGGAGCATAAAACACAACGACGAGTTGGAATACCAG
CGATCCATTAACTCCATCTTTTCCTATTCTGTTGTTTCCTCCATCTTTCCAACTGAGAAA
TGGAGGATCCAATCTGTTATGGAGAAAATCATGTGGAATCCAAATATTTCTCTGTTTCAA
TTCTGGGCACCCATCAAGGTCAATGGATCCACTTTCCTGTCCACTGCGGATCAACCATTT
GCTTTCTATAACCAACTTGATAAGAGGCTCTCTTCATACAGGAAGCTCTGTTTAGATACT
ATGATTCCCATGGACAACAAGGAAATTCCATTTGGTCCCCCTGGACGAGTTTTCTCAAGA
TACTTGCCAGAATATAACCCCAACGTCCTAAGCTACTCCTCTGCAGAGTTTCCACTGCTT
CAAACTGCAATTCCCTTGGGAATTCATTCTTATTATGCATTTCCAGTTTCCAACCTCCAT
GATGGCCAGTGCCTTGGTGTATTCGAGATTGTATCTACACTACCATATCTCCCTCTTCAC
ACCCTTATTAAGTGGTTGAATTTCGAATCAGTTGGCTTGTACATTCCTAACTCATTGGGC
ATGCCTTTTGGACCTTCAAAGCGGCTGGATGATGAAAGACTTGGCGATATAAAGGCCGGG
TTATATGAGATCCTTGAAAGACATAGTTTACCCTTTGCTCAAATTTGGATTCCTTTTTCT
CTACCTTCCTCTTTGAAAGTCTTGTATCGTGTTGGTGGCTCAATCAATGAACGTGCACAA
TCAATGTATTATGAGTTTGAATATTCTTCTGAGGTCTGTTTTATTAAGAGTGGCGAGGCA
TTGGTTGGGAGGGCATTTGCATCCCAAGGTTCATGCTTTTGCAAAGATGTTACTCTATTA
AGCATCAATGAGTACCCTGTGTTGCCTACTGCACGAAAAGCTAGATTCACTCACAGTTTT
GCAATTTGTTTGCAAAGTAAATGCGCCAACAATTTTGTATGCGTAGTTGAGTACTTTCTG
CCAAGCAACGAAATGGCTGTTAGAGATACAAAGACTTTCTTAAACATGCTTTTAACCACA
ATGAAAGAACTACTTCCAGGTTTCATAGTTGCTTCTGGAAATGAACTAGGGCAGAGGATG
CTCGTTGAAGTTGTTAAAGTTTCCCCGAATGATGAACTTGACTCCTTTGAAATTGGCCAA
ACTCTGCCGAGTGTTCAATCACTTCAGGATGGAGGAGAAACAATAGCAATTGATTCTTTC
TATCAAGAGTCAGATTTTATGAAGAAGCTTGTTGATGCTCTTGCACTAGTGATTTCTTCT
TGTTCATTAGACAAGTGTGACTCACTCAACTGTGAAGGGACAGTGGAAGTTGATCCGTCA
CTGCCTCATCCAATAGAGGAAGCTGTGACAAACAGAGGAACGGTTAACGTGGATGTAGCA
CATGATGACCACATTGAGGATACAAGTGAAATGATGCAACTTGATTCACACTTTGAGCAA
CCAAATTTAGAAATTAATTCTGTAGGCGCAAGGAGTAATGACACAGTGGAGCATAGGGAT
TTTAGTTATGCAAGACAATCGGTTGAAGCTGAAGCTATAAACAGAGAAAACAACTTTGTC
AGTGGAGCAATGACTAACAACGAGAAAATCCATTCACAGAAGAACAACGAATTACGAAGG
ATAGAAAAAGATCATGGGATTACTCGCGAGACTTTGGAGCAGCAATATGGCACGCTTCTT
AAAGATGCTGCCAAAAATCTAGGTGGTAAGTTCACTAACTTTAGCGCATTTGAGATTCGT
AATTCTTTTTGTGTTATTATATATGATGTACGCTCATATGCCTTTAACCGGAATGATTTA
TGCATAGGTTCACTGAAATCCCTTTTGTGGACTTCTTTTATTGCAGTTAGTCGAGCAACA
CTAAAACGGATATGTAGAGTATATGAAATCACTAGATGGCCAAATCATAAGACTAGAAAG
GTTAATGTCCATGTTAGCCATGGCGTATCTTTTCAAGGTGCTGAACCATATGTGGGCGAT
CAACAATGTCCTGCTCTTTCCCAAGAAAAAGGCATCAAATATTTGGGTAACAAAAGATCT
CCTGCAACAGGAGTATCTCGTGATGGTGTGATGACTTTAAAGGTTACATATAGAGCTGAT
ATGATAAAATTTCAACTCTCCCTTTTATCAACGAGGGTAGAATTGGAGGGGGAAGTGGAA
AAGAGGTTTAAGATATCAAGGTTTTCAATAAAGTATCAAGATGAAGATGACGATTGGATT
TTGATAACTTCTGATTCAGATTTGAGGGACGGGATGAATTCACTTAGATTGTTGGGAAGG
AATACAATGAGATTAGAGGTTAACCCAGAATCTGACACATGA
