Microarray Probes on PGSC0003DMT400034897
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_31296_PI426222305 |
JHI_St_60k_v1 |
CTTCTAGTATTTGTTTGTTTGATAGGCCATTGTATAGCTAGCTACTGCAAATTACAGGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400034897
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400034897 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G29930.1 |
+3 |
4e-162 |
457 |
228/256 (89%) |
chlorophyll A/B binding protein 1 | chr1:10478071-10478874 FORWARD LENGTH=267 |
Transcript Sequence (971 bp)
>PGSC0003DMT400034897 971 pgsc_dm_v3.4
CAAATATTCATTCAGTGTAGTAGCAACATTCAAGAGTATTTCATTTTATTTCTATAATGG
CAACTTCTACAATGGCTCTTTCTTCCTCTTCTTTTGCCGGAAAGGCGGTGAAACTCTCAC
CATCTTCTTCTGAAATCACTGGAAATGGGAGAGTCACCATGAGGAAAACCGCTGCCAAGG
CCAAGCCAGCCTCCTCTGGTAGCCCATGGTATGGTCCTGACCGTGTTAAGTACTTGGGCC
CATTCTCTGGTGAGTCTCCAAGTTACTTGACTGGTGAATTTCCTGGTGACTATGGATGGG
ATACTGCTGGACTTTCAGCTGATCCTGAAACTTTTTCTAAGAACCGTGAGTTGGAGGTGA
TTCATTGCAGATGGGCCATGCTTGGAGCTCTTGGTTGTGTTTTCCCTGAGCTCTTAGCTC
GTAACGGTGTCAAGTTCGGTGAAGCTGTATGGTTCAAGGCTGGATCCCAGATTTTCAGCG
AGGGTGGACTTGACTACTTGGGCAACCCTAGTTTGGTCCATGCACAAAGCATCTTGGCAA
TTTGGGCTTGCCAAGTTGTGCTAATGGGAGCCGTTGAAGGTTACCGTATTGCTGGTGGGC
CTCTCGGTGAGGTTGTTGACCCACTTTACCCTGGTGGTAGCTTCGACCCATTGGGCCTTG
CAGATGACCCAGAGGCTTTTGCTGAGCTCAAGGTAAAGGAAATCAAGAACGGTAGACTTG
CTATGTTCTCCATGTTTGGATTCTTTGTTCAGGCTATCGTCACAGGAAAGGGTCCATTGG
AGAACCTTGCCGATCACCTTGCTGACCCCGTTAACAACAATGCCTGGGCCTTTGCCACAA
ACTTTGTCCCCGGAAAGTGAACTTCTTGAAATAGAGCCTCTTCTAGTATTTGTTTGTTTG
ATAGGCCATTGTATAGCTAGCTACTGCAAATTACAGGAGATTATATATGAAATTTTTATT
TGGTCTCCAAT
