Microarray Probes on PGSC0003DMT400034706
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25445_PI426222305 |
JHI_St_60k_v1 |
ATGGCCAAAAGTGCTACACCTGTGGAACAACTTCGCCAAGCAATACACACACTAACAAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400034706
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400034706 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G32950.1 |
+1 |
0.0 |
906 |
459/632 (73%) |
Transducin/WD40 repeat-like superfamily protein | chr2:13978000-13983282 FORWARD LENGTH=675 |
Transcript Sequence (2811 bp)
>PGSC0003DMT400034706 2811 pgsc_dm_v3.4
CACACTAACAAGTCTCTCCAGTTTTGAAAAACACCCGTTCCCCGCCAACGTGGTTCTTTT
ATACCCTCACAAAAATACAACAAACAACAAAAAAAGAAATCACACATACAGTAATCATCT
CTCCCATTCCAATTTCCTTTTCATCTTCTATACTATAAATATATATCATAACAACAATTA
TGTAATCGACGCATTGTAACAGATCGATAGACTTGAACCTTGTTCGTACTTGACCTCCTG
ATCAGTTCGATCGGGCGGAGTGTGATGGGAGGAGGAGGAGAGCGTAATTCAATGGGAGTA
TTAGTGCCGACGGTGAACGCCGGTGAAACTTCAGCTCCGGCCGGAGCGGAGACGGAGGCG
GCGGTGGTTGGGACGGAGGTGGTGGTGGTGACGGAGAGAGTTGCGGAGGAGGAAGAGGAA
GAGGAAGAGGAGGTGGATAAGGATATACTGTGTCCGATATGTATGCAAATTATAAAGGAT
GCGTTTCTAACGGCGTGTGGACATAGTTTTTGTTATATGTGCATTGTTACTCATTTGCAG
AATAAAAGTGATTGTCCTTGTTGTTCTCATTACTTGACGACGAATCATCTTTATCCTAAT
TTCCTTCTTAATAAGTTATTGATGAAGAAATCTGCTCGCCAAATGGCCAAAAGTGCTACA
CCTGTGGAACAACTTCGCCAAGCAATACAGCAGGGATGCGAGGTGTCCGTTAAAGAGCTG
GATAGTCTATTATCACTTCTTATGGACAAGAAAAGAAAAATGGAACAAGAAGAAGCTGAA
ACAAATCTTCAGATTCTGCTCGAGTTTCTCCAGTGTTTAAAGAAGCAAAAAGTTGACGAG
CTTAATGAGATTCAAAATGATCTCCAATACATTAAAGAAGACATAAATGCTGTGGAGAAG
CGTAGAATAGAGTTATATAGGACAAGAGGTAGATATTCTGCGAAAATGAGAACGCTAGTA
GATGATTCATCTGCAATGACAGTCAGGCCTCCATTGAGAGATAAGGGAAGTGGTGCAATT
GTTTCTAGTCCTGTCAATTTACAAGAACAAGGTCGTGCTGGCACTTCACAGACCAGGAAT
ACTGATACAAGAGCTCCTCAGAATCCTCAAATTGTGCAACGGAAGGATGACAACCAAGGT
GGATCAGATTCACAGGATCCTAATCAACCTGGAAAGTCATTAGCAAGGAAACGACGCGTT
CATGCACAGTTCAATGAGCTTCAAGATTGTTACCTACAAAAGAGGCGCTATTGGGCAAGA
CAGTCGCAGAAACAGGGAGAAAGGGTAGCAAATATCATGAATAGAGTAGGTTATTCTGCG
GGACTTGAGGATTTTCAATCTGTTCTGTCTACCTTTACACGATACAGTAGTCTGCGGGTT
GTTGCTGAACTCAGGCATTCTGACATTTTCCACTCAGCCAATATTGTTTCAAGTATTGAA
TTTGACCGAGATGATGAATTGTTTGCTACTGCTGGGGTATCACGAAGAATTAAGGTCTTC
GAGTTTTCATCAGTGGTAAACGAACCAGCTGATGCGCAATGTCCAATTGTTGAAATGTCT
ACCCGATCTAAACTAAGTTGTTTGAGTTGGAACAACTACACTAAAAACCACTTAGCAAGC
AGTGACTATGAGGGCATAGTAACGGTTTGGGATGTTACAACTCGTCAGAGTGTGATGGAG
TACGAGGAGCATGAAAAACGAGCATGGAGTGTTGACTTTTGTCGTACTGAACCTTCTATG
CTTGTATCTGGTAGTGATGATTGCAAGGTTAAAGTTTGGTGCACGAATCAGGAAGCTAGT
GTTCTTACCATTGACATGAAAGCTAACATTTGCTCGGTGAAGTATAATCCTGGATCCAGT
GCTCACATAGCTGTGGGTTCTGCAGATCATCACGTTCACTATTACGACTTGAGAAATATT
AGCCAGCCACTGTACATTTTCAGTGGACACCGTAAAGCTGTTTCATATGTAAAATTTCTA
TCAAACTATGAGCTAGCTTCTGCATCAACCGATAGTACACTACGTTTGTGGGATGTCAAT
GAGAACGTTCCACTGCGTACGTTTAAAGGACATACAAACGAGAAGAACTTTGTTGGTCTT
ACAGTAAACAGTGAATACCTTGCATGTGGAAGTGAGACAAATGAAGTCTTTGTCTATCAC
AAGGCAATTTCTAAACCAGCAGCTTGGCACAGATTTGTTTCTGATGATCAGAATGATCCA
GACGGGGACATGGGATCATTTTTCATCAGTGCTGTTTGTTGGAAACGGGACAGCCCAACG
ATTGTTACAGCAAACAGTCAAGGGACAATAAAAGCACTTGTTCTTGCTGCTTGATCATAA
CATTTGATTGATCAAACAATCAATCAAACACAAATGATCGATAACGTTTGACTGATGAAG
AGGCTTTATTGCAAAGGAAAAGAGGTATGAGTTCTCCATTGTACAGGAATGCTAACATTG
GTTTTCGATTTTGGTGGTTCCTTATAACAAAGTCTGTTTGATGGGAACGCAGATGTAGCT
TTTGACGTGTGATTACATAGTAGTAGAACAACTACGCCTCAGTCCCAAACTGATTATATA
GTAGTAGAAGTCACATAATTCTTATAGTTTGTGAATCCTCTCTTTAATGGGGTTGTGTTT
TATAGTTTATAGTATATAGAGATCAGGATAGTAGAGTGAAAGTTGTAGTGAAAACATGAA
TTTTACTTCTGTAAAAAAACTGTTTTGCCAGCTTTACCATGTAAAGCATTATTTTCACAC
TTTCTATTCTTTTCAATTGTCAAAGGTCTTTTTATTAGTCTCCATTTTCCA
