Microarray Probes on PGSC0003DMT400034631
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25392_PI426222305 |
JHI_St_60k_v1 |
CTAGACTAGTGTTAGTGAGTAGTTGTTGTCACATATTATTGGTGCTTTGTTTTGAGTACA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400034631
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400034631 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G66180.1 |
+3 |
0.0 |
555 |
278/426 (65%) |
Eukaryotic aspartyl protease family protein | chr1:24647221-24648513 FORWARD LENGTH=430 |
Transcript Sequence (1520 bp)
>PGSC0003DMT400034631 1520 pgsc_dm_v3.4
CCCCCCCTCCCCCTAAAAAAAAATCTCTCTTCACCATGGGATCTTACAAAACTTTCTTGA
TTTTCTTCCTCAATTTTCTTCATCTATCAATAGCCAAAAATCTCCAAGAAAACAACACCC
TTTCACTTTCTTTCCCTCTTACAACAACCCCTTTATCTCAAAATTCAACTTTGAAATCAA
ATTATTTATTTTCATCTAAAGCCATGACAAATAACATCCCATCTTTGAACTATAAATCAA
ATTTCAAATATTCGATGGCTCTTATTGTTACACTTCCTATAGGGACACCTCCACAAGATC
AACAAATGGTTTTAGATACTGGTAGTCAACTTTCTTGGATTCAATGTAACAAAAAATTAC
CTAAAAAAACACCTCCAGCAACGTTTGATCCATCTTTATCGTCCTCTTTTTCTGTTTTAC
CTTGTAACCACCCTCTATGTAAACCGCGAATTCCTGATTTTACCCTTCCAACATCGTGTG
ACCAAAATCGTCTTTGTCACTACTCTTACTTCTATGCTGATGGTACTTTAGCTGAGGGTA
ATCTTGTACGAGAAAAAATTACGTTTCCAAATTCCCAAACTACCCCTCCTTTGATCCTAG
GTTGCGCGACCGAGTCGCGCGATGCGGAGGGTATTTTGGGAATGAATCTTGGGAGGTACT
CATTTGTCTCACAAGCTAAGGTGCAAAAATTCTCTTATTGTGTGCCACGTAAGCAAGGTA
ATAAAATAATGCCAAGTGGAACATTTTACCTAGGTCAAAATCCCAATTCACATATGTTCC
AATACATAAATCTTTTGACTTTTCCTCAAAGTCAACGCATGCCTAATATGGATCCCCTAG
CTTACACTCTTGGTATGGTGGGGATAAAAATTGGCGGGAAAAAGTTGAATATCTCCGAAA
AGGTTTTCCGGCCAGACGCTGGTGGTTCAGGACAAACAATGATCGATTCAGGCACCCAAT
ACACGTTCCTGGTTGAGGAGGCGTATAGTAAAGTTCGTGATGAAGTTGTTAGGTTAGTAG
GTCCGAAATTGAAGAAGGGGTATGTTTTTGGAGAATCGCTCGATATGTGCTTCGATGCTA
TAAATTCAGTACAAGCTGGTCAAGCGATAGGTGATATGACGTTGGAATTTGAAAATGGAG
TTGAAATCTTGATCAATAAAGAGAATGTGTTGGATGATGTAGGTGGAGGTGTTCATTGTG
TGGGGATTGGAAGATCACAATCACTTGGAATTGCAAGTAATATTATTGGTAATTTTCATC
AACAAAATTTGTGGGTTGAATTTGATTTGAGTAATAAAAGAGTTGGTTTTGGTAAAGTAG
AGTGTAAGTAGGGTACTAGACTAGTGTTAGTGAGTAGTTGTTGTCACATATTATTGGTGC
TTTGTTTTGAGTACATATTTTAATTTAAACTTTTTGAAATAAAAAATTGTATATGTTAAT
CTAGAGGAGTTGTTGGGGGTTTGTGTAAATAAAATATTTTCTTTGACATAATAGAAAATT
ACATAAAATATGGATGTACA
