Microarray Probes on PGSC0003DMT400034511
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25379_PI426222305 |
JHI_St_60k_v1 |
TCCTACCAAAAGAGACAAGCACTAGGTAACTCTAGTCTCTAAATTGGGGTAGTTAAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400034511
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400034511 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G20300.1 |
+3 |
4e-112 |
321 |
154/268 (57%) |
Protein of unknown function (DUF3537) | chr3:7079832-7081809 REVERSE LENGTH=452 |
Transcript Sequence (1506 bp)
>PGSC0003DMT400034511 1506 pgsc_dm_v3.4
AATTGGGGTAGTTAAAAAAATTGAATCTTGAAATTTTTTGTATTGATTTGGTGTTTTTTG
GGTTTTTCATATTATGCCCAACAGTGTGATTCCCAATTGGGGTAATTAAAAAAATTGAAT
CTTGAAATTTTTTTGTATTGATTTGGTGTTTTTTGGGTTTTTTCATATTATGCCCAACAA
GTGTTTGTTGTAAGTTCTAGCTGAAGAAATTTGTAAAAATGGAAGAAGGTGAAACAGGGT
TGTTGTTGCAGAGTAACAAAGAATTGCTTTCTTCAGGTTATTCAATACATGAATATTCTG
AAGAAATCAAGAAGATTAAATCAGCTCTGACATGGGTTTTTCTTGATCAATCAAATCTAT
GGAGGGCTGGTCTTTCTTGGTCACTTTTTTTCATTCTTACAATTGGGGTTCCATTAGTAT
CTCACTTTATGTTTGCTTGTTTAACCTGTGATACTATGCATCAGAGGCCTTTTGATGCTC
TTGTTCAAGTTTCTTTATCACTTTTTGCAACTTTATCATTTGTTAGTCTTTCTAGCTTTG
CTCGAAAATACGGGATTCGGAAGTTTCTGTTTCTTGATAAATTGTATGAAGATAGTGAAA
AGGTTCAACAAGGATACACTGAACAGCTACATAGGTCGATGAAGATCCTCTCATCTTTTG
TCCTCCCTTCTTTTATTGCTGAGAGTATTTACAAGATATGGTGGTTTTCCTCCGGGGGAA
CCCAAATTCCTTACCTGTATAATGCTGCTTTGAGCAATATCTTCGTATGCATACTGTTAA
TAAGCTCCTGGCTCTACCGGATATCAATTTCCTTCCTTGTATGTGTCCTATTCCGGTTAA
TATGCTCCCTGCAGATCCTTAGACTGGAAGAGTTTGCTCAAGTTTTCGAGAAACAATCTG
ATGTCTCATCGATCATGATAGAACATCTCCGAATCAGAAGAAATCTTCGCGTCATTAGCC
ATAGGTTCAGAGTTTTCATTTTGTCAACTCTCATACTAGTTACCATAAGCCAGTTTCTTG
CCCTGCTTCTTATTACTGAGCCTAGCTCCACTGTGAACATCTTTACAGCAGGTGAACTTG
CGGTAATACTTCATTCCCACCTTCTGGTTCATTTCCTTTTATTGATTACGTAGCTGCAAA
CGTTATTACCGTCCTGTTTTGACATTGTATACATGTTACGATGCAGTTGAGCTCAATTAC
TCTGGTAACTGGACTTTTCATGTGCTTACGTAGTGCAGCAAAGATCACACACAAAGCACA
AGCTGTTACATCACTTGCTGCCAAATGGCATGCTTGTGCAACAATCAGCACCTTAGATGA
CATGACTGAGGAGACTCCCATGGCTCGGACCGTGACATCTCAGGTGGTATACCCTATCAA
TTCCAGTTGGGACACAGACGAGGAAGGAGATGGAGACGACGTGTTGGACAACACAAATAT
GGTACCAATTCATGCCAGTACAATATCCTACCAAAAGAGACAAGCACTAGGTAACTCTAG
TCTCTA
