Microarray Probes on PGSC0003DMT400033788
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49804_PI426222305 |
JHI_St_60k_v1 |
TTGGAAATTCAGCAGCTGAAAATGGAGCTGGAATTGGCAAAGACTTCAAATCAATCAAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400033788
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400033788 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G36650.1 |
+2 |
1e-37 |
143 |
107/339 (32%) |
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:15359994-15361194 FORWARD LENGTH=373 |
Transcript Sequence (1679 bp)
>PGSC0003DMT400033788 1679 pgsc_dm_v3.4
AAACAATCCATTTATAGAATCTTGATATTTCAATTTCAACTCTCAAAAAACTTTAGATTA
ATTCATAAACATGGAAAACAATAGCTCAAAAGTAGAGATGATGAAGCCAGTATTCCTCAA
GGCTGGAATACCAATAGCCCTCACTTTAGCTGGTTACATAATTGCCAAAATCACCACTAA
AAAAATCTCTCAAATTTCACCAATTCAAGAAAATACTCATGAGGTCTCAAGAAAAGATGA
AAATGGTCATCAAAATCTTGAAATTTCAGAATCTTTATCTTGTATAGAAGCACATGATTA
TGATGATGATCATTGTTCTACAAATACCCTTTACAATGATTCATCAAAAAGTTTTGATCT
TTATCAAAATAAATCCAAATTTCAAGCAAATCATCATGAAATCTCAAGAAATGGAGATGG
TCATCAAAATCTTGATAATTCAGAAACTTTATCTTGTATTGAATCTGATGATAATGATCA
TTGTTCTACAAACACCCTCTACAAAGATTCATCAGAAAGTTTCAATCTTTATCAAGAAAA
ATGCAAAATTCAAGAAAATCCTCATGAGGTTTCAAGAAATGAAGATGGTCATCAAAATCT
TGAAAATTCAGAAACTTTATCTTGTATTGAAGCTAATGATGATGATCATTGTTCTACACA
TACCCTTTACAAAGATTCATTAGAAAGTTTCAATCTTTATCAAGAAAAACACAAAATTCA
AGAAGATATTAAGGCCAAATTTCAACACTATACTCACTTGAAAGAGAAAGAAATTGCACT
TATGGATATGCAATACAAGTTGTTATTAGAGATCAATAAAGTTGAGTTCTTTAGTAAGGA
AATTACACTAATGGAAGCAGAGAGCCAAAGATTTCAAAATATGGTAATTGAATATTTGAG
AATTATGGAACTTCTTGATTTGTCAAATTCAGAAAATAGTTTGCTTCAAAAAAGAGTTAA
GAAGCTTTTGAAGAAGATTAAAGAACATTCAAGAGTTATGAAGGAACAAAAATTTCAACT
TGAAGCTAAGGAAAAAGAAATTTCAAGAAATCAAGAAGGGCTAGAAATGAAAGATCATGT
CATCAAGGAAATGGAATTGGAAATTCAGCAGCTGAAAATGGAGCTGGAATTGGCAAAGAC
TTCAAATCAATCAAAGAATGATGTAGAAGTTGTGACAATAGAAGATTACAAAGAATTGGT
AAATGAACTTGAGCAATTGCAAAAGGACAAAGCTAGTGAAGACAAAGAGCTAATATACTT
AAGATGGTGCAATGCATGTTTAAGACATGAATTAATGAAAAGAAATCAAGAACAAATGGA
ACAAGGGAAAAATCAAGAATTGAATTTGGGAGAAGAAAATAGAGAAAATGTTGAAGAATT
TGTACCAAAACTACATGATTTAATAATTGGGAGGAGTTCATCAGTTGGGCATAATGAATC
TTGTTTAAATTCACCTATTAATGATCATTCAAAAAGGAGAAAATTAATGCAAAAGTTCAA
GAAATGGGTAGAGGGAAGTGATAAAATGAAAAATGAAACAAATTGCTTTAAGAGGCATTG
TGTTTCTGATCATACTGAGAATTTGATTCATCCTGCTAGAAAATCATGTTCTAGTGCCTA
ATTATGTGACTATATATTTGTAATAATTCCTTCATGATTTGTGGTTGGTAAAAACTTAC
