Microarray Probes on PGSC0003DMT400033560
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20400_PI426222305 |
JHI_St_60k_v1 |
CTTACTGTTGGAGAAGAGAGCTCTGATAAGATGAAGAAAACCCCTTTTACCAGATTCTCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400033560
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400033560 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G63140.1 |
+1 |
0.0 |
577 |
281/350 (80%) |
chloroplast stem-loop binding protein of 41 kDa | chr3:23327006-23328620 REVERSE LENGTH=406 |
Transcript Sequence (1206 bp)
>PGSC0003DMT400033560 1206 pgsc_dm_v3.4
ATGGCTGCTCTTGCTTCTTCATCCTCTCTTCTACATTCGTCTTCATCTTTCAATTCTTCT
TCAACTCCATCAATCTCCCCTGTTTCCCGAATTTCTCTTAAATTCCCTTCTTCTCTCTCA
ATTTCCCCATCTTTCCTTGCATTTTCTCTAAATTCAAGGCGGGTTTCCCCTAATTCCTAC
TCCAGTACTACTGTCGTTCAGGCGAGTGGTGCAGTTGAGAAGAAGAAGGTGCTTATTGTT
AATACAAATAGCGGTGGTCATGCAGTTATTGGGTTCTATTTTGCTAAAGAGCTTTTGGGA
TCTGGTCATGATGTTACTGTTCTTACTGTTGGAGAAGAGAGCTCTGATAAGATGAAGAAA
ACCCCTTTTACCAGATTCTCAGAAATAACCGGTGCTGGTGGTCGAACAGTATGGGGTAAT
CCCGCAGATGTTGGGAAGATTTTAGAGGGTGAAGTATTTGATGCTGTTTTGGACAACAAT
GGTAAAGACTTGGATTCTGTAAGTCCTGTAGCTGACTGGGCCAAGAGTTCAGGTGTCAAG
CAATTTTTGTTTATCAGCAGCGCTGGAATCTACAAGCCCACTGATGAACCTCCTCATGTT
GAAGGGGATGCTGTGAAAGCTGATGCTGGCCATGTGTTAGTCGAGAAATACATATCTGAG
ATATTTGGTAGTTGGGCAAGTTTTCGTCCCCAGTACATGATCGGCTCTGGCAATAACAAG
GATTGTGAGGAATGGTTCTTTGATCGTATTGTTCGTGGACGACCAGTTCTAATTCCTGGC
TCTGGAATGCAGCTAACCAACATATCTCATGTCAGGGACTTATCATCCATGCTTACTCTG
GCTGTCCAGAATCCAGCTGCTGCTAGCGGTCACATCTTCAACTGTGTAAGTGACCGTGCT
GTGACATTGGACGGAATGGCAAGATTATGCGCTAAAGCTGCAGGAAGCTCTGTTGAAATT
GTGCATTATGACCCCAAGGCAGTAGGAGTTGATGCCAAAAAGGCTTTTCCTTTCCGCAAC
ATGCACTTCTATGCTGAGCCTAGAGCTGCCAATGAGATTCTGGGATGGAGTGCTACAACT
AACTTACCGGAAGATTTGAAGGAGCGATATGAGGAGTACGTGAAAATTGGCAGAGACAAG
AAAGAAATGAAGTTTGAACTAGACGATAAGATACTAGAATCTCTAAAAGTACCAGTTGCT
GCTTGA
