Microarray Probes on PGSC0003DMT400033411
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29814_PI426222305 |
JHI_St_60k_v1 |
TGGAGTACATGTAATGAACCTTGGTGGTTGGTTGTATTACAACCCAATCTTCATAGTAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400033411
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400033411 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G38540.1 |
+1 |
9e-25 |
96 |
57/118 (48%) |
lipid transfer protein 1 | chr2:16130418-16130893 FORWARD LENGTH=118 |
Transcript Sequence (617 bp)
>PGSC0003DMT400033411 617 pgsc_dm_v3.4
AAGCAAATACATTTGTAGTCCATAAAACTTCTCTACTATTTCTATCTTTTCTCAGTTTTT
GTATCAATGGAAATGGTTAGTAAAATTGCATGCCTTGTTGTTTTGTGCATGATAGTGGTT
GCACCCCATGCAGAGGCACTAAGCTGCAGCCAGGTTACATCTGGCTTGGCTCCTTGCCTC
CCATATCTCCAGGGACGCGGCCCTCTAGGAGGGTGTTGTGGTGGAGTTAAGGGTCTGTTG
GGTGCAGCCAAGACCCCAGCGGACCGAAAGACAGCATGTACTTGCCTCAAATCAGCCGCT
ACTGCTATTAAAGGCATTGATGTGGGCAAAGCCGCTGGTATCCCTAGTGCTTGTGGCGTA
AACATTCCTTACAAGATCAGCCCCTCCACTGACTGCTCCAAGGTCCAGTAAGGTTGATGA
AAGTTCAATTTTCCAAAAGGCATAATTTGGTAGTAATGTGATATAGCTTGCGGAGAAAAA
TAAGATGGATATATCGATCGATCGAGTTTAATCCATCATTTTATATGTTGTCTCTTTTCT
TTTGTATTTGTGTTTGTTGGAGTACATGTAATGAACCTTGGTGGTTGGTTGTATTACAAC
CCAATCTTCATAGTAAT
