Microarray Probes on PGSC0003DMT400032622
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35461_PI426222305 |
JHI_St_60k_v1 |
TGATTTTAGCGCGAAGGAATTGAGTATGGATATGGAGAACATTTTATCTTGTAACGGGGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400032622
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400032622 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G51990.1 |
+1 |
5e-42 |
150 |
105/212 (50%) |
C-repeat-binding factor 4 | chr5:21117113-21117787 REVERSE LENGTH=224 |
Transcript Sequence (1398 bp)
>PGSC0003DMT400032622 1398 pgsc_dm_v3.4
GTTAATAACTAAACTATAAAAACTTAAGTTATCTCCGAACACAAACATAAGTAGCGGAGA
ATATTATAATATGTAAATATAAATTTATACCTCGTTAAAAAATTAAAAATCAAACACAAA
ATATCACCCGTGTGTCTCTTTCCAGAGAAGTCGACAAAGTTTATGTCCCATTGATGACCC
AAAACATAAAAAGGAAACGTAGCTTATTTATTGAAGCATACCCCACAAAGAAAAAGAAAA
GTTGTACTTGAAATTGATTTCCGTGCGTGTTCGTGTTTATATCGTAGGCACGTGCTTTCA
TTTTCTTTCTTAATTCATAATCCAAAAGTATATCAAAATTCTATAAAAACCACTTTCACA
ATATCAATTCACAACACTTCAAACACCAAGAAAATCTGTAGCTTGTTACAGGCTGACACG
TGTCTAAAAATGAATAACAACTCTAGTTTGTACTCGTCAGATCTCAACCCACTAAGTGCA
ACAACACCTTCCGATGAGGAAGGATTAATACTATTATTAGCTTCAAGCCGGCCCAAGAAA
CGGGCCGGAAGGAAGAAGTTCAAGGAAACTCGCCACCCAGTTTATAGGGGAGTGAGGAGG
AGGAATAACAACAAGTGGGTTTGCGAGCTACGTGAGCCTAGTCAACAAAAAAGAATATGG
CTAGGGACTTACCCTACTCCTGAAATGGCGGCTCGAGCTCACGATGTTGCTGCATTAGCA
CTTAGAGGTAATCTAGCCACTCTGAACTTTGCTGACTCTCGTTGGCGGTTACCAGTGCCA
GCATCAAAGGACCCCAAGGACATACGCCAAGCAGCCGTTATAGCCGCACAAGCTTTTTCT
CAGGATACTGAAGTCGATTATATGAATGAGGAAGTTAATTCCAATACTACTGATGAGATT
GATATTGCGAGGGTTAATAATGGGAGTAGTAGTGATTTTAGCGCGAAGGAATTGAGTATG
GATATGGAGAACATTTTATCTTGTAACGGGGGAGAAGATAACTACATGTTAGAGACGGAA
GGATGGCGAGAAAAGATGGCCGAGGAGCTTTTGTTTTCACCAACTCCACGTTTAGGTAGT
TGTTTCAGTTGGGATGACGTGGAAACTAGCGACGTCGAGGTGTCTTTGTGGAGTTACAGT
ATTTGATACCAACTAGCCAGTTAATTACAATCTAGGAATAGCATTTTACAAAAAAGGAAA
AAAAGAAAAGAAAAGGGAATTAATAGTCAACTAGAATGATGTTATTATGTACTCCCTCCG
TCCCTATTTACTTGTCCATATTTCCTTTTTTGGTTGTCCCTATTTAGTTGTCCATTTTGA
CAAATCAAGAAAGGACAACATATTTTTTCCTATTATACCCTTATTTACACTTCTTGAAAA
TTGTAAAAGTGTATGTTG
