Microarray Probes on PGSC0003DMT400032526
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35530_PI426222305 |
JHI_St_60k_v1 |
TAATATATGTGCTTCCTTCGTATAGAAAACCCGTTCCGTTTACTGAATTCTTGCAAACTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400032526
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400032526 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G11960.1 |
+2 |
4e-69 |
207 |
116/130 (89%) |
PGR5-like B | chr4:7175340-7177709 REVERSE LENGTH=313 |
Transcript Sequence (2110 bp)
>PGSC0003DMT400032526 2110 pgsc_dm_v3.4
ATTCCATCTAACAATTTCAATGCAATTTACTAGTTATTGCACATGAACGAATTTATCCCG
ATAGAATTTTAACCAAGAAAACAAAAAAGTTTTTGTTTTTTTCAATTTTGAATACCCTCC
ACACATTCATCACGTAACCTTATCTTCATCGTTACCAAAACCCCATCAAATTGCCACTTA
ACAAAAAAAAATTCACAAATGCAATATTCATTTCTACACTCCATCCATCTCCGCCAGAAA
TGGCCACCAAATTTGGATTCACTATAACAACAAGCAGTCGCCTTTTTCATGCTCCGTTTA
GAAAAAAACCAATTTTTTCTCCCAATTCTGTAAGCCCTTTGATTAATTTTGGTGGAAGAA
AGTTATCTATTCGACGTAGGCTATTGTTTCTCTCTCCTAAGGCCACCACCGATCAGCCAG
GTCAGGTCAAGGAGGATGAGATTGAAGACAGTAAAATCTTGCAGTACTGTAGCATTGACG
GTAAAGGAAAGAAGTCTCTCGGGGAAATGGAGCAAGAGTTTCTTCAAGCACTACAAGTAC
TTAAGCATCTACGATCTCTTATCTTTTGTCTTAGCTTCTATCAACATTAATTGCACTCTT
TCCTGGCGTTGTACCACAGTCATTCTATTATGAAGGAAAGGCCATGATGTCAAATGAGGA
ATTTGATAACCTTAAGGAAGAATTAATGTGGGAAGGAAGCAGCGTCGTCATGCTAAGCCC
CGATGAACAGAGGTTTCTCGAAGCTTCTATGGCTTATGTATCTGGAAATCCAATTATGAC
TGATGAAGAATATGACAAGCTGAAGATGAAACTTAAGAGGGATGGCAGCAATATTGTGGT
TGAGGGTCCAAGGTGCAGTCTTCGAAGTAGAAAGGTTTATAGTGACCTTTCTGTTGATTA
TCTGAAGATGTTCTTGTTAAATGTCCCTGCTGCTGTTGTTGCTCTCGGATTGTTTTTCTT
CCTAGACGATTTGACTGGATTCGAGATCACTTATCTTTTGGAGGTACGCCTGTATTGGTC
CTTATTTCATTGCTAAGGTATCAAACTCTTCAAAAATACCGCTGGGTGTATGCTGAATCC
TCCAAAAGTTACACCTTTTTGGAAGATGTAAAACGGCTGGGGCATCATTTTTGGAGGGTC
CGAGTAACATAACTAGCTAGATGAAAGATCAGAGTATTCATTAGACTTTGTAATGATATA
ATTTATCGATTTGCAGCTTCCGGAGCCTTTCAGTTTCATTTTCACATGGTTTGCTGCTTT
GCCATTGATATTATGGCTATCCTTTACAATCACAAATGCCATTGTTAAAGATTTTCTCAT
CTTAAAGGGCCCCTGTCCGAATTGTGGAACAGAGAATACTTCCTTCTTTGGTACAATATT
ATCGGTATCTAATGGGGGTTCCAGCAACAAAGTAAAATGCTCATGTTGTGGGACAGACTT
GGTCTATGATTCAGATACGCGTTTGATTACATTGCCTGAAGGAAGTAGTGCATGATTCGA
GGTATATACCTAGCCTTTTTATCTATTATAACCTATGCTGCTCAGATTGTTTAAAAGTAC
CACCAAGTGTGTGTCGAAATCCTCCAAAAGCATTGCATTTTTGGAGGATCCTATATAGGT
GCTTCAACAGTTTTGGAGAGTCTGAGAGATAATATATTATCGCTTGTATGGATAAGTATA
ATATATCAGAGGGGGAGGGGGATCCAGGACTTTAACTTATAAGTTCCGGACCACAACCCC
TTTTGTTTATTGGGTTCTCTGAATATATCATTTATACATATTACGTGAATTTCATAACAC
AAATACATGATTTGAGCCAATCGCCCTTAATATATGTGCTTCCTTCGTATAGAAAACCCG
TTCCGTTTACTGAATTCTTGCAAACTGCAGGATGATTTTATATATGGAGATATCTGCACA
AGAGATTTGCTCTTTTAACACAAGCTGCGCATGGAAGAGAGACCATATGATGCAGTTTGT
GAAAATGAAAAACAAGTTCAGTATTGAATTTGTGAATGATTTGCAACTTGTATTGTGTGA
ATATGTTATGTAATGTATTGTGTGTGACTATAAGTTTATCAATAAAAAAAAAAACAGTTT
TTAATGAGCT
