Microarray Probes on PGSC0003DMT400032514
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35525_PI426222305 |
JHI_St_60k_v1 |
GATTCCCCATCCGGAGTCACTGTTATTGTTAAGCCCTCTACTCTAAAATTCTCCAAGTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400032514
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400032514 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G04110.1 |
+1 |
2e-75 |
247 |
128/275 (47%) |
Subtilase family protein | chr1:1061457-1063784 REVERSE LENGTH=775 |
Transcript Sequence (849 bp)
>PGSC0003DMT400032514 849 pgsc_dm_v3.4
ATGATTATCTATAGTTTCCCTGAGTATGGTTTCACTACGTCTGCTGATGCTCACGTCCTT
CCAGCTCTGTTTATTACATACAAAGACGGAATTGAAATTCTTGACTACATGAACTCCACA
ATTAAACCAATTGCAAGAATTTCATTCCAAGGATCAATAATCGGAGATAAAGATTCCCCT
GTGGTTGCTGTATTTTCTGCTCGTGGACCAAGCTACGCTAGTCCTGGTATCTTGAAGCCT
GATATAATTGGTCCCGGTCTTAATATTCTTGCTGCTTGGCCTACCTCCGTTGACTACAAC
AAACACACAAAATCTACCTTCAATATTCTATCAGGCACCTCCATGTCTTGTCCTCACCTC
AGTGGAGTAGCAACATCGTTGAAAAGTACACACCCGACTTGGTCCCCTGCAGCTATCAAA
TCAGCAATCATGACAACCGCTAACACACTGAACGTCGCCAATGATCCTTTCTTAGATGAA
AGGCTCCTTCCGGCTAACATCTTTGCCATTGGTGCAGGACATGTCAATCCATCAAGAGCT
AATGATCCAGGACTAATCTACGACACCTTGTTAAAAGACTACCTGCCTTACCTGTGCGAT
TTGAATTACACAAATCAACAGGTGGGAAGCATCGTGCAACACAAAGTGAATTGTAAAAAA
GTAAAACACATTCCTGAAGCTCAATTAAATTATCCTTCATTCTCCATCAAATTCGGGGAG
AGTTCTCAGACATATACAAGAACAGTGACTAACGTCAGGGAAGCTAAATCATCTTACACT
GTGGAAATAGATTCCCCATCCGGAGTCACTGTTATTGTTAAGCCCTCTACTCTAAAATTC
TCCAAGTAA
