Microarray Probes on PGSC0003DMT400032493
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35434_PI426222305 |
JHI_St_60k_v1 |
GTTGGAAGTTTGCTTTCGCGTTTTTCTAGTAGTGGATCCATCAACACCAACAACAAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400032493
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400032493 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G12110.1 |
+1 |
0.0 |
754 |
397/587 (68%) |
nitrate transporter 1.1 | chr1:4105341-4109290 FORWARD LENGTH=590 |
Transcript Sequence (2162 bp)
>PGSC0003DMT400032493 2162 pgsc_dm_v3.4
GGCCTTTGTATCATCAATCTTCTTTTAGCTCCCATCAACAAAAATACACCTTCCATTTTT
ATAATTCTCATTGCTCATTGGGTCCAATTTTGTGGCTAAAAAGTAAATAGTAGAATATTT
GCAAAAATGTCACTTCCTGAGACACAAAATGATGCAAAAGCTCTCCCTGATGCTTGGGAT
TACAAAGGGAGGCCATCTCTTAGGTCCTCCTCTGGTGGTTGGGCAAGTGGAGCAATGATT
TTAGGTGTTGAAGCTGTGGAGAGGCTAACCACACTAGGTATTGCTGTAAACTTGGTGACT
TATTTGACTGGAACTATGCATTTAGGCAATGCTACTGCTGCCAACAATGTCACCAATTTT
CTTGGAACTTCTTTCATGCTCACTTTGCTTGGTGGCTTCATTGCTGACACTTTCCTTGGA
AGGTATCTTACAATTGGAATATTTGCCACAGTTCAAGCAATAGGTGTCACAATCTTGACC
ATTTCGACAATAATCCCAAGCTTGCGACCACCAAAATGTGAACAAGGTAGCTCATCATGC
ATCCCGGCTAGCGGCAAACAACTCATGGTCCTATACATCGCGCTATACATGACCGCCCTC
GGTACAGGCGGTCTAAAATCAAGTGTCTCGGGATTTGGGACCGACCAATTCGATGATTCG
AACGAAAAGGAAAAAGGACAAATGATAAAATTCTTTGATTGGTTCTTTTTCTTCATAAAT
GTTGGTTCACTAGGTGCAGTTACAATATTGGTTTATGTACAAGATAATTTGGGAAGGGAA
TGGGGTTATGGAATTTGTGCATGTGCAATTGTTATTGCACTTGTATTATTTTTATTTGGT
ACAAGAAAATATAGGTTTAAAAAACTTGTTGGAAGTCCATTAACACAAATTGCATCAGTA
TTTGTGGCTGCTTGGAGAAATAGGCATATGGAATTGCCATCAGATTCATCACTTCTTTAT
GAAATTGATGACAATGTTTTTGGTGAAGGACACAAAAAAAGAAAGCAAAAATTGCCTCAT
AGCAAGGAATACCGATTCTTGGACAAGGCAGCCATTAAGGAAGATGGTCTTGAAAGTAAT
GTTGTGAACAAGTGGAAATTGTCAACATTAACAGATGTTGAAGAAGTAAAATTGTTATTC
AGAATGTTACCAACTTGGGCCACAACAATTATGTTTTGGACTACCTATGCCCAAATGACC
ACATTTTCTGTTTCACAAGCAACCACTATGGATCGACACATCGGTAAATCCTTTGAAATC
CCGCCCGCCTCGCTCACCGCATTCTTCGTTGGAGCCATCCTCTTGACCGTAATTTTCTAC
GATCGAGTCATCGTTCCGATTTGTCGACGTGTTGCTAACAAACGTCATGGACTCACCCCA
TTGCAAAGAATTTTCATAGGGTTAATCCTTTCAATTATAGCCATGGTTGCATCTGCCTTA
ACTGAGGTTAAAAGATTAAATACTGCCCACTTAAATGGGCTTACAAATGACCCAAATGCC
ACAATTCCATTAAGTGTATTTTGGCTAATTCCACAATTTTTACTTATTGGGGCAGGTGAA
GCTTTTACATACATTGGCCAATTGGATTTTTTCTTAAGAGAATGTCCAAAAGGTATGAAA
ACTATGAGTACTGGCCTATTTTTAAGTACCCTTGCATTAGGGTTTTTCTTTAGTTCAATT
TTGGTTACAATTGTACATATGGTGACTGGGACAACACATCCATGGATAGCTGATAATTTG
AACCAAGGGAAGTTACATGATTTCTACTGGCTATTGGCAATATTGAGTGTGTTGAACTTG
ATGGTTTTCTTGTATACGTCGAAAACGTACGTGTACAAGGAGAAGAGGCTTGCAGAAATG
GGGATTGAACTCGAGGACTCTGGACCAGTTTGTCACTAAAATAGAAGATCACACTCTATC
ACTACTAGAAAAATGTGAATTTCATGTTGGAAGTTTGCTTTCGCGTTTTTCTAGTAGTGG
ATCCATCAACACCAACAACAAAAAAAGACACTTTTTTCCCCTCCTTTTTTGGACTTTATA
ATTAACTTTTGGTTTTCTTTGATTGAGCTTGAATAACTCTTTATTGGGAGAGTTATGTAA
TATAACAACCTTGTTTTATATGTACAAAAGATGGAAAAGAGCTTAGGTAATGAAAATTTA
TA
