Microarray Probes on PGSC0003DMT400032087
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10811_PI426222305 |
JHI_St_60k_v1 |
GAGTTGTACTATGTCTATTAATTTGACAATTAGTGCAATTCAGGATCTTGATTGCCAGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400032087
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400032087 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G46150.1 |
+1 |
7e-07 |
48 |
61/210 (29%) |
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:18961424-18962089 FORWARD LENGTH=221 |
Transcript Sequence (625 bp)
>PGSC0003DMT400032087 625 pgsc_dm_v3.4
AAATTTTTTCTCTAAATTGCAAAAATGGCCACTGATCAAAAATACCCACTAGCACCATCA
AATATTATGCCTAGAAGTGATGCAGAATTTGCTACAAATAATTTCCAATCAAATAATCAA
AGAAGGAAGAAAAAACTCAGAAGTACTTTTCTTCTCACAATTTTCCTTACTGGAATTATT
CTTCTATTTTGCTTCACATTTCTTCGAATTAAATCGCCTAAAATAAGGATCGAGAATATC
AGAATAACGAACGATGGTGATGGAAGAATTAATTTCTCCGCGCAAGTTTTTTTAAGAAAT
CGGAATTTTTGGCGTTACGGTTATGATAGTACTTTAGGTACTATTAATACTGCAGAAGGT
ACAACTATTGGACGATTTGTTATTCCCGACGGAGAAGTACGACGTCGTTCGACGAAAACA
ATTTATGTTATGGAAAATTTTATTTTGCCTTCAAGACTTAACAATACTTCTGGGATTTTA
CCAGTGATTAGTGAAGCTAAAATCAGAGGGAAAGTGAAAGTGTTTAGAGTATTTAGGTGG
AAAAAAAATGTAGATTTGAGTTGTACTATGTCTATTAATTTGACAATTAGTGCAATTCAG
GATCTTGATTGCCAGTGATAATAAT
