Microarray Probes on PGSC0003DMT400031899
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10495_PI426222305 |
JHI_St_60k_v1 |
GAAGGACATCGTACGTGTTCTTTGTAAATCTTATCGATCATGTGCATGTTGTATCAAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031899
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031899 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G00870.1 |
+2 |
1e-62 |
212 |
137/414 (33%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:362230-363639 REVERSE LENGTH=423 |
Transcript Sequence (1463 bp)
>PGSC0003DMT400031899 1463 pgsc_dm_v3.4
AAAAATCATCTCTGGAAATTCAATAATAATGCAAGACTTTATCTCTTCTTCTTCAACTTC
ACTACTTAATACACTTCAAAAACGCCTTCATTATATAATCCACAATCGTCAAGAATGGTG
GGTTTATGCCATCTTTTGGCAAGCGTCGAAAGACACAAATGGCCGTCTTATTTTCTCGTG
GGGGGACGGCCATTTCCGCGACACTAACGATTTAGCGCTGACCAAAGTCCATATCGCTAA
CGCAGACAGTAACGTTAGCGATATGGAGATGTTTTATGCGGTGTCAGCGCCAAATTGTTT
TGTGTCCGAGGACGACCTCATCGTCCATGCTTATAATTCTGGCTCCTATGTTTGGCTGAA
TAATTATTACGAATTGCAACTTTATAACTATGATAGAGCTAAAGAAGCTCACTTGCATGG
AATTCGGACTCTGGTTTGTATTTCTACTCCTCATGGTGTTGTTGAATTGGGTTCCTCTCA
AGTTATCCCAGAAAATTTGGAATTAGTCCAATTAATAAAGTCCTTATTTGGATTAAGTAA
TAATAATAATAATAGTCCGTCACAAGGTGTTTCAAGTTTTAATTTTGTTCCTTTAGGAGA
TCATATTCTTCAGAGAGAAATGAATACGAAGGAAATAATTATGGGTAACAAATCGTCTGA
TTCAGGAAATTCGGATTATGATAATGAGTCCTCGGCTATCAATAAGGATGCTAATTCACC
TAAAAAACGAGGAAGAAAATCCAGTTCCAGCACAATAGAGCGAGCAACCGCGAAAAATCA
CGTTGAAGCAGAGAGACAGAGACGGGAAAAGCTGAATCATCGGTTCTATGCTCTAAGGAG
CGTTGTCCCTAACGTGTCTAAAATGGACAAAGCTTCTTTGTTAGCTGATGCGGTTACTTA
TATTAATGAGCTCAAAGCCAAAGTGGAAGAATTCAAGGGTAAAGTTGAAGAATTAGAGTC
CAGTAAAATTATTCAGAAAAACAGAAATTATTCCTTTACGGAGATGTATAGCGCATCTTC
TGCAGTAGTTGATCGTACGAATAATATAATTAATTCATCGTTCGCAGCGTATGGAATGGA
AGTGGAGGTCAAGATTATTGGAGTAGAAGCTATGATTCGGGTGCGTTCACCCAATGTGAA
CTATCCATGTGCCAGATTGATGAACGTGTTGCGAGAGTTGGAGTTTCAAATTCACCATGC
AAGTGTTTCAAGTGTCAAGGAGATGATGCAACAAGATGTTGTCATTAAGATTCCTCATAA
TGTCACTAATGACGAAGCCATCAAATCTGTTATCCTCACAAAGTTGAGTCTTGCTTACAT
TTGATACTTACTACTCAGCTAGTATAGTATTAGTATGAGTAAGTTTAATTTCATTGTCAT
ATCAAGTATGAAGGACATCGTACGTGTTCTTTGTAAATCTTATCGATCATGTGCATGTTG
TATCAAATATAATCTACTACTAC
