Microarray Probes on PGSC0003DMT400031811
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10759_PI426222305 |
JHI_St_60k_v1 |
CGACACTGAAGATGTTCTGACTCAAATCACAGATGATGTTCTTGAAGAATCAATTATGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031811
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031811 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G00440.2 |
+3 |
3e-29 |
125 |
196/876 (22%) |
Protein of unknown function (DUF3741) | chr4:195176-198225 FORWARD LENGTH=835 |
Transcript Sequence (2731 bp)
>PGSC0003DMT400031811 2731 pgsc_dm_v3.4
TTTGTCTCTCACTCTTTTGTTTTTCTCCAAAAAAAATTACTCCAACTTTCTTCAACATTA
ACACATTTGAGAAGAACTATGATTTTTCTCTTCTGGTGTCTGAATCAACTTGCATGCAGT
TTGACTGATTAATTGATTGGATATCTGTTATCTCGCACCAGCAACAGGGTAGAGAAAAGT
GTTCATTTGTGATGGAGAAAAAGAGATCATCAAGAAATCCACAACAGATAGATAAGAGTC
AGCTTAATTGTATGTGGGGATTGATTAGTAGCCTTTATTTTGGTCAAAATCAGAGGAAAC
AGAAGCTGCTTTCAAATGGGAAAGCTTCTACTAAGAATGTTATAGGCAAAAATCCAAGAA
GGATTGATGCTTTAACTTACTGTAGTGACCAATTGTATGGCTATGAGGATGGAGCTGAAG
TGGAAGCTTTAGGAGTTCGTACGGGTGATAAAAGGATTAAGACTTCCATTCAAGAAGAAA
TTTCTGGTGAAATGCAGAAGAGCACTCAAATCATAGCCCGAAATGAGCAACACGAAGAAG
TAGATTATGGACTATTTGATCATATGATAAGTAAATACAAGCCATCATCAAAGAAGAGCT
GTAAGAATCAGTCACCTGTTTACGATTGGAAGGATACTGAGACCGGGGATATTCAGCAGG
CTTCAAGTTCAGCGGAAATGTCTATTCATAAGTTAAAATTGGCGTCCATATTAGAAGCTA
TCGGCAGTCAGATTCATCAAGAGAATGGAGATTCAAAGAGGAGTTCCATTAAGAATGATC
AGCTTGATGAGATCAGTTTACAAGTACTTCAGACGAGTGCTAAAGCATTTATCGATCAAA
TGTTCATAGACAGGAAGTATATCAGCAAAGGTAATGTGAGCTATGAGCCTGAACAGTTTT
CCAATGCATTAGAGATGTTAAATTCAAATGGAGATTTGTTTCTGAAACTCCTACAAGATC
CAAATTCACTCTTAGCTAAGCAAATCCGAAACATGCAAAACGTGCAAATGGCAAGAGATT
CGATCAAGTCCTTCATGAGTAACAAACTACCAGACTGTGACATTTCAAAGAGTGAACAGA
AGCATCATCAATCTGCATCCGAAGAAAGTTCCAGCTCCCAACCTTCAAATAAAATAGTTG
TTCTGAAGCCGATTCCTAGAACTGTTCGATGTTCAGAAAATGTTGACTGCTATTGCTCGT
CTATGCAGTCTCATCATAGCACAAGTACTAAAGGGGAAAATGTGCAGCACAAGAACTTTT
CTTTCAAAGATATCAAGAGGAAACTGAAATATGCAATGGGAGAAAAATGGAAAGAGAAGC
ATTTGATTTCAGTAGGAAGTACTGTACATAAGCTTCATAGCCTCAGCGATAGGCCGAACC
TAGAAGTTGTTAATGAAGGGGGAAGTTCATGCCTTACTACTGCACGATCCACTAACTCGC
TCACCGAGCCCAACAGCAAGAATGAGGCGCAAAATAAACAAAAATCCACATGTGAAGCAC
CTAAAGTCTCCTTTCTGACTGAAAAAGTGCGTAGAAAGTTGGACGCGTCTGCCATAAGCT
ACACCAAGAAACGGGAGCTGGATATATCTATGGAGGCAAAGAGACATCTTTCTCAAAGAT
TGAACTTTGTCAATACTACAGGTGAAGCTGTGATGAGCACACAACCCTCAAGAACATTGG
AAAGAATTCTTTCCTCGCCCGAGCATGATCGTTTGTTCAACTATAGTTCAAAACAGGATC
TCAAGAGTAATCCTGAACAAATGAGTTACAACAATACAAGTATAGCGGAATTGCCCCGTG
AGCCTACACATACTAGTTTTCAAAGTCCTCAAAGACACAAGGATTGCCAGCATCTCAATA
GCTCAATGGTGGCTTCACCTTCAGAAGTTTGGTCTCCTGGTTCTTCAACAGACGTTTCAT
CGACGAGTCCATATAGCATGTACAAATTAAGAGGTGTTGACAGTATTATGGACAGAGGAG
ATCACCCAAGTCCGGTGTCAGTTTTGGAACCAGTTTTCACTGATGATCTAATCAGCCCTT
CAAGAAACGAACCATCTGTCACTGTATTACAACCACGTCGTATTGACTTTGAGGGATGTT
TGAACAAGGAATCCACTGAAAATGCCATACTGAATCGTGCTGAGCCTGATGCCCTTCGTA
CTTACATTCAGTCAAGTCTGCATAATCTTCACTTGAATTGGGAAGAGCTTTGGCTAAATA
GGCATCTTTCAGAACAAATGCTCGATGCAATGCTATCCGATGAACTAGAGACATTAGCAT
TACAATGTCATTCTGAGCCTAAACTCCTTATGGACTACACAAATGAAGCTCTACTAGAAG
CATATGATTCTCACTTCAGATTTCCTCCGTGGCTATCGTTCTTTCAACCCAAAATCTGGT
CCTTTCCACCAGAAAAACATCTAGTGGAAAAGGTAATGAATGAAGTGAGACAACACCTTA
TTCCATTGATGGAACAACCTACATTGAATGACTATGTTGAGATTGATTTGTCAAAATCTG
GTTCATGGCTCGATATCCGAAACGACACTGAAGATGTTCTGACTCAAATCACAGATGATG
TTCTTGAAGAATCAATTATGTATACTGTTCTCCAACTTCATACCTTTTTCTTGTGTAGCT
AAATTTAGCTTCTTTCATGAAACATTCATTTTTTCTTTTTGTTGTAATGAGAATTTATAC
TCCTTAGCTAGTATATATCTTCTTGTTTATA
