Microarray Probes on PGSC0003DMT400031810
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10487_PI426222305 |
JHI_St_60k_v1 |
CGACACTGAAGATGTTCTGACTCAAATCACAGATGATGTTCTTGAAGAATCAATTATGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031810
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031810 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G00440.2 |
+3 |
2e-27 |
119 |
193/884 (22%) |
Protein of unknown function (DUF3741) | chr4:195176-198225 FORWARD LENGTH=835 |
Transcript Sequence (2824 bp)
>PGSC0003DMT400031810 2824 pgsc_dm_v3.4
TTTGTCTCTCACTCTTTTGTTTTTCTCCAAAAAAAATTACTCCAACTTTCTTCAACATTA
ACACATTTGAGAAGAACTATGATTTTTCTCTTCTGGTGTCTGAATCAACTTGCATGCAGT
TTGACTGATTAATTGATTGGATATCTGTTATCTCGCACCAGCAACAGGGTAGAGAAAAGT
GTTCATTTGTGATGGAGAAAAAGAGATCATCAAGAAATCCACAACAGATAGATAAGAGTC
AGCTTAATTGTATGTGGGGATTGATTAGTAGCCTTTATTTTGGTCAAAATCAGAGGAAAC
AGAAGCTGCTTTCAAATGGGAAAGCTTCTACTAAGAATGTTATAGGCAAAAATCCAAGAA
GGATTGATGCTTTAACTTACTGTAGTGACCAATTGTATGGCTATGAGGATGGAGCTGAAG
TGGAAGCTTTAGGAGTTCGTACGGGTGATAAAAGGATTAAGACTTCCATTCAAGAAGAAA
TTTCTGGTGAAATGCAGAAGAGCACTCAAATCATAGCCCGAAATGAGCAACACGAAGAAG
TAGATTATGGACTATTTGATCATATGATAAGTAAATACAAGCCATCATCAAAGAAGAGCT
GTAAGAATCAGTCACCTGTTTACGATTGGAAGGATACTGAGACCGGGGATATTCAGCAGG
CTTCAAGTTCAGCGGAAATGTCTATTCATAAGTTAAAATTGGCGTCCATATTAGAAGCTA
TCGGCAGTCAGATTCATCAAGAGAATGGAGATTCAAAGAGGAGTTCCATTAAGAATGATC
AGCTTGATGAGATCAGTTTACAAGTACTTCAGACGAGTGCTAAAGCATTTATCGATCAAA
TGTTCATAGACAGGAAGTATATCAGCAAAGGTAATGTGAGCTATGAGCCTGAACAGTTTT
CCAATGCATTAGAGATGTTAAATTCAAATGGAGATTTGTTTCTGAAACTCCTACAAGATC
CAAATTCACTCTTAGCTAAGCAAATCCGAAACATGCAAAACGTGCAAATGGCAAGAGATT
CGATCAAGTCCTTCATGAGTAACAAACTACCAGACTGTGACATTTCAAAGAGTGAACAGA
AGCATCATCAATCTGCATCCGAAGAAAGTTCCAGCTCCCAACCTTCAAATAAAATAGTTG
TTCTGAAGCCGATTCCTAGAACTGTTCGATGTTCAGAAAATGTTGACTGCTATTGCTCGT
CTATGCAGTCTCATCATAGCACAAGTACTAAAGGGGAAAATGTGCAGCACAAGAACTTTT
CTTTCAAAGATATCAAGAGGAAACTGAAATATGCAATGGGAGAAAAATGGAAAGAGAAGC
ATTTGATTTCAGTAGGAAGTACTGTACATAAGCTTCATAGCCTCAGCGATAGGCCGAACC
TAGAAGTTGTTAATGAAGGGGGAAGTTCATGCCTTACTACTGCACGATCCACTAACTCGC
TCACCGAGCCCAACAGCAAGAATGAGGCGCAAAATAAACAAAAATCCACATGTGAAGCAC
CTAAAGTCTCCTTTCTGACTGAAAAAGTGCGTAGAAAGTTGGACGCGTCTGCCATAAGCT
ACACCAAGAAACGGGAGCTGGATATATCTATGGAGGCAAAGAGACATCTTTCTCAAAGAT
TGAACTTTGTCAATACTACAGGTGAAGCTGTGATGAGCACACAACCCTCAAGAACATTGG
AAAGAATTCTTTCCTCGCCCGAGCATGATCGTTTGTTCAACTATAGTTCAAAACAGGATC
TCAAGAGTAATCCTGAACAAATGAGTTACAACAGTAGGCTTCTGTTCCATTTATTTAAGA
ATTCTTTGGTTTTCATATGCACATTGCCTTTTAGAAGTTTAAGTTGTTAACATTCATTTC
TTGCAGATACAAGTATAGCGGAATTGCCCCGTGAGCCTACACATACTAGTTTTCAAAGTC
CTCAAAGACACAAGGATTGCCAGCATCTCAATAGCTCAATGGTGGCTTCACCTTCAGAAG
TTTGGTCTCCTGGTTCTTCAACAGACGTTTCATCGACGAGTCCATATAGCATGTACAAAT
TAAGAGGTGTTGACAGTATTATGGACAGAGGAGATCACCCAAGTCCGGTGTCAGTTTTGG
AACCAGTTTTCACTGATGATCTAATCAGCCCTTCAAGAAACGAACCATCTGTCACTGTAT
TACAACCACGTCGTATTGACTTTGAGGGATGTTTGAACAAGGAATCCACTGAAAATGCCA
TACTGAATCGTGCTGAGCCTGATGCCCTTCGTACTTACATTCAGTCAAGTCTGCATAATC
TTCACTTGAATTGGGAAGAGCTTTGGCTAAATAGGCATCTTTCAGAACAAATGCTCGATG
CAATGCTATCCGATGAACTAGAGACATTAGCATTACAATGTCATTCTGAGCCTAAACTCC
TTATGGACTACACAAATGAAGCTCTACTAGAAGCATATGATTCTCACTTCAGATTTCCTC
CGTGGCTATCGTTCTTTCAACCCAAAATCTGGTCCTTTCCACCAGAAAAACATCTAGTGG
AAAAGGTAATGAATGAAGTGAGACAACACCTTATTCCATTGATGGAACAACCTACATTGA
ATGACTATGTTGAGATTGATTTGTCAAAATCTGGTTCATGGCTCGATATCCGAAACGACA
CTGAAGATGTTCTGACTCAAATCACAGATGATGTTCTTGAAGAATCAATTATGTATACTG
TTCTCCAACTTCATACCTTTTTCTTGTGTAGCTAAATTTAGCTTCTTTCATGAAACATTC
ATTTTTTCTTTTTGTTGTAATGAGAATTTATACTCCTTAGCTAGTATATATCTTCTTGTT
TATA
