Microarray Probes on PGSC0003DMT400031776
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10678_PI426222305 |
JHI_St_60k_v1 |
GGGGGTATGTGCTAGTGCTTCCTCTATAGTGTTCTTTAATATTTTCCATATAAACTTTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031776
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031776 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G23490.1 |
+2 |
0.0 |
686 |
355/529 (67%) |
Protein of unknown function (DUF604) | chr4:12251580-12253973 REVERSE LENGTH=526 |
Transcript Sequence (2457 bp)
>PGSC0003DMT400031776 2457 pgsc_dm_v3.4
AAAAGATGACAACTTTAGCTTAAAAGAACTCTCTTTTTCCTTCTCTCCCTCTTAGCTGTT
GCTGAGAGAAATCACAAGAGTTGCAGTTTTTCTTCTTCTTCTTCTTGAAATCAGCAATTC
CCCAATGCATGTTGTCCCCTTCTCTTCATCTCTCTGAAACCCCTTACATTTTTTTTATAG
CCTTATCTCTTCATTGATTCTCACAATTCCTTTACATTTTCACACACCCTTTTCTCATTT
TCATCAGATCCATCACTCATCTCCTCAAAATTCTGTGAAAAATCCAAAATTTAGGCTGAA
AAACTGTTACCCAAATGGGTTCTTGAAACATTGTTGTGAAGCTTCTGGGTTTTTTTTGTT
GTTGAGGGGTTGGGTTTTAATGACGATGAAAGTGACCCAGAAAGTAAAAGATTCAGAAAA
AATCATCTGGGATCAGATGAGAAGTGTTTCTGGGTCACAAATTTCAATTTCTGGTTCACA
TAATCGAGCTTTTTTGAAGTTTATGGTATGGCTTTTCCTTTTTGCTTCCACTACCTATAT
GGTTTATACACTGAAGCTCGTTTCGTATAAATCTTGTAACAATAACGACGTTTTCAGTCG
TAATAGTTTGTTTATTCACTCATCGGAAATCAATTCCAGTAAATCCAGTAAATCGATCCG
GCCGGTGATAGTTAAGGAAGAAACAGAAGAGAAATTGGAAGAGAAAACCGGGTTGGAGCA
TATTGTATTCGGCATTGCAGCTTCTGCGAAGCTGTGGGATAAACGGAAGGAATATATAAA
GTTATGGTGGAAACCGGAGGAAGAAATGAGAGGGATTGTTTGGTTAGATAAACCGGTGAA
AACTTCGAAAGGTGACGGAGAATCTCTGCCGGAGCTGAGAATTTCCGGTGATACTTCACG
GTTTGCTTACAGAAACCGGCAGGGTCATCGGTCTGCAATACGGATATCGAGGATTGTATC
GGAGACATTAAGGTTAGGGAGGGAGAATGTGAGGTGGTTTGTTATGGGTGATGATGATAC
TGTGTTTGTTACTGATAATTTAGTGAGGATTTTGAACAAATATGATCATAATCAGTATTA
TTATATTGGAAGTTCAAGTGAAAGTCATTTGCAGAATATTTATTTTTCTTATAGTATGGC
ATATGGGGGTGGTGGATTTGCTATTAGTTATCCCTTAGCTAAAGCACTTGAGAAAATGCA
AGATAAGTGTATTCAAAGGTACCCTGGGCTTTATGGTTCTGATGATAGAATGCAGGCTTG
TATGGCTGAACTTGGTGTTCCACTCACCAAAGAACTTGGCTTTCACCAGTACGATGTGTA
CGGGAACTTGTTTGGTTTGCTAGCATCACATCCAATAGCGCCATTGGTAACATTGCACCA
TCTTGATGTGGTGGAGCCAATCTTTCCCAATGTGACTCGAGTGCAAGCTTTACGGCGTCT
TACAGTTCCAATGAAGCTTGACTCGGCTGGTCTTATGCAACAATCCATTTGCTATGACAA
AGCTAACGGTTGGACCATATCAGTGTCGTGGGGATTTGCAGTTCAAATATTCCGTGGAGT
GTTGTCCCCCCGCGAAATAGAAATGCCATCAAGAACTTTCCTAAATTGGTATAAAAGAGC
AGATTACACTGCATATGCTTTTAACACGAGGCCTGTTGCGAGGAACCCATGCCAAAAACC
TTTTGTGTTCTATTTATCAAGTGCCAAAATGGATCCTTCCAGCAACCAAACAGTGAGCCA
GTATACTCGTCATCGAGTTCCTCATCCAGCATGCAAGTGGAAGACGACAGACCCTGCTGA
TGTTGATCGCGTGCAGGTTTATAAGAAGTCTGACCCACATCTATGGGATAGGTCTCCAAG
GAGGAATTGTTGCAGAGTCTTGAGCTCAAAGGGAAAAAGCATGGTGGTGGATGTGGGTGT
ATGTAAGGAAGGTGAGCTCAGTGAAGTATGATGATGAGTAACTCGAGCCTTTCTTCTCCT
TCCGTCTTCTCTCCTTGTATTTGCCCCTCAATTGTTTCTCGTATGTATTTCTTCATTTGT
TGAACTTACGAAAAATTTTCTTGGATCCATCCAAGTTTCTTTCACTTATGACCACTATAT
TAGGGAAAAAGATGAACTAATGTAAAATATCCTAGGTATATAAACTAGATATCCTTGTCT
GATTATTAATGTAGCATAGTTTTTTCAGTTACTTTGATCTTTCTTGTTTCCAAAAGATTT
CTGAGGTTCAATTTTCTGCATTTTAACCTGGAGGTCTTATTCTTCTTCCTTCCTAGTGAC
TCCCTCCTTTTTTTGGTAAGTAACGCCTCTGGAAACCGTGTATTTACCTTTATGAGGTAG
GAGTATGGTCTGCGTACACTATCCTCTTCAGACTCTACTTGTAGGAGTTCGGGGGTATGT
GCTAGTGCTTCCTCTATAGTGTTCTTTAATATTTTCCATATAAACTTTCTATGTGGA
