Microarray Probes on PGSC0003DMT400031740
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10472_PI426222305 |
JHI_St_60k_v1 |
CTTGGAGATCATGATTACAACACCAACAACAAGAGATCATCATCAAGAAAGAAGCCTATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031740
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031740 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G41590.1 |
+1 |
5e-44 |
152 |
91/193 (47%) |
Protein of unknown function (DUF567) | chr5:16632221-16633896 REVERSE LENGTH=221 |
Transcript Sequence (897 bp)
>PGSC0003DMT400031740 897 pgsc_dm_v3.4
CAAAAAGTTCCCAAAAAAAAAAACACTATACATATCTAGAGAGAGAAATATTAGAAAAAA
AATAAAAAAATGCTTCTCTTCTTAAAATCAATAAGTTTCAGATCTTTGAATCATCAAGAT
TTCAAGAACAATAACAGCAGCTGCAAGGAATTAACAACAACGTCGTCATCATCGTTGTCA
TCATCATCGTGTATATCTTTAACAGTATGGAGAAAATCACTTATATTTAGCTGTAAAGGA
TTTACAGTTATTGGATCCGATGGAAATTTAGTGTATAGAGTTGATAATTATTCTGGTAGA
CGTGACCAAACTATTTTAATGGATGCTTCTGGCAAACCCATTCTTACTATATGTCGGCAT
AAGCAGAAACTAAGGATAGTAGACAACAATTGGTTCATATATGAAGGAGAAGTACTTGGA
GATCATGATTACAACACCAACAACAAGAGATCATCATCAAGAAAGAAGCCTATATTTTGT
GTAAAGAAACAAATGAAGATTTTACATAGTAATATTAATGTACTTGCCCATGTTTATTAT
CATGGAACATCATCAGACAAGACATATTCTTATATTATTGAAGGGTCATATGCAAACAGA
ACATGTAAAGTGTTGGATGCAAAATCAAGAAATGTTGTGGCAGAAATTAGGAAGAAACAA
GCAGTAATTGGTGGTGTTACTTTTGGATTAGAAGTTTTTGTATTAGTTGTAATGCCAGGA
TTTGACTCTGGTTTTGCTATGGCTATGGTGTTGTTGTTAGACCAAATGTTCTCCTAAGTG
TTGTTTCAATATATGTTGATTAATTTTATGTAGTGATCACTCATTTGAGGAAATGTGATG
TTTTCTCTTTATTATATGATCTTGGATAATATATCGTGATCGTTTGATATATGAGAT
