Microarray Probes on PGSC0003DMT400031731
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10579_PI426222305 |
JHI_St_60k_v1 |
GGTTGGAAATTGTTGTTGTTCTGTTGTTGTTTCTGTGATATTTAGATTGTACACGTCGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031731
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031731 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G64110.2 |
+1 |
0.0 |
1103 |
577/816 (71%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:23796887-23801255 REVERSE LENGTH=829 |
Transcript Sequence (3586 bp)
>PGSC0003DMT400031731 3586 pgsc_dm_v3.4
GCGGCAACTGTGTAATACACACTCTAACCACCTTTCTCCTCTCCTTTCTCATTTCTTCGC
CGCCGTGAACAACCGCTTCTTCGCCGTGAACCACCGCTTCTCATTTCTTCCTTATCATCA
ATAAACATATACATATACGGTGTTTCTCAGGTTTTCGAGATCCATTCGCATTAGAAACTA
CGTAAAAACGATCAATTTTATTTATTTTTCTGGAAACAAGAAAAAAGCAAAGGCGGTAGT
AGGAGTACGATTCAGGGATGAACAGGAGATTTTTATGAAGGAAAACACTTTATATGCAGT
GTGAACAGACTGCACGAACGTAAAAAAAAAAATTTAAAAATACAGAGTGCGAGAAAAGGT
GATTATTGTGACGCGTTTTGTTTTCGGAATCTGAATGATCTTCGAGGAGGATACTGATCT
ATTTTTGATTGAGATAAGTTTTAGAAAATTCCAAAAATTTGAATTTCTGTGTGTTTTACC
AAAGGTGACGGTGAAGTTTTAACGATTTTAAGCACTTTCGGGTTCAAATCTGAGTTTAAT
TTAGATTCTCTGTTTCTCATCCATAGAGATATCGTGATTTTTGAGTTGTTCTGTTGGCGG
TGCTTTGACGTGCTCTGTTTTGCGATTTCGGATATTTGAGAAAGTTTATTTTGAGTCTAA
ACAATGGAACAGAAGAATATGTTGTTGTCAGCTTTGGGTGTGGGAATAGGTGTTGGTGTT
GGAATTGGATTGGCTTCAGGGCAGACGGTTAGTAGATGGGCTAGTGGATCCGCTGCGAAT
GTTATTACGCCGTTGATTATGGAGCAAGAGATGCTTAATCTCATAGCCAATGGCAAGGAT
AGTAAAGTCACCTTTGATGAGTTTCCATACTACCTAAGCGAGCAAACAAGGGTGTTGCTG
ACAAGTGCTTCTTTTGTTCATTTGACAAATGCCGACTTTGCTAAGCATACTCGCAACCTC
TCCCCTGCTAGTCGAACAATTTTGTTGTCAGGGCCTGCTGAACTTTATCAACAAATGCTC
GCCAAGGCATTGGCTCATTACTTTAATGCCAAGTTGTTGCTACTGGATGTAACTGATTTT
TCACTGAAGATGCAAAGCAAATATGGAGGAACATGCAAAGAATATTCTTTTAAAAGATCT
ATATCGGAGACAACGGTGGGGAGAATGTCCGGAATGTTTGGATCATTTTCCATGCTTCAG
TCTAAGGAGGAAAACAAAGGATCATTGCGTAGGCAAAGCAGTGGAGTAGATATTGGATCA
AAAGATGGATCTTTTATAGCTACAAATTTGCGGAGGAACGCATCTGCCTCAGCCAATTTG
AATGACATAAGTTCATATGGCTCATCAGGGAATCTAGCTCCACTTATGCGCAACAGTAGC
TGGGCTTTTGATGAGAGGCTTCTTATACAGACCTTGTACAAGATTATTGTCAAAGTATCA
AAAACCAGTCCCATGGTTCTGTATCTCAGGGATGTCGAGAAGATCCTTTGTAGGTCGGAA
AAGATATACGTGTTGTTCCAGAAAATGCTGAAGAAATTATCTGGGGCTGTTCTGATCCTG
GGTTCAAGAATTGTGGACCCTGGAAATGATTATAGGGAAATAGATGAAAGGCTTTCTTCA
GTATTTCCCTATAACCTTGAAATCAAACCCCCAGAAGAGGAAACTCATCTTGTTAGTTGG
AAGTCTCAACTAGAAGAGGATATGAAGATGATCCAGTTTCAGGACAACAGAAATCACATA
ATGGAAGTACTTTCTGCTAATGATATTGAATGTGAAGATCTAGGTTCAATTTGTATGTCG
GACACCATGGTCCTAAGTAACTATATAGAAGAAATTGTGGTATCCGCAATCTCGTACCAT
CTGATGAATACAAAGGACCCTGAATACAGAAATGGGAAGCTTGTTATCTCATCTTCAAGC
TTGTCCCATGGATTGGACGTATTTCAGGAAGGAAAATCTGCTCAGAAGGATACCATAAAG
CTCGAAGCACAGGCTGAAACATCGAAGGATGCTCTAGGCCGAGAAATTAGTACTACAAAA
CCTGAAGCCAAAACTGAAGGTGTCCTCCCAGAAAACAAAGGTGAAGCTGAAGCTCCGGCT
CCACCGGTGATGGATGGAAACATTACAACCCCAGCCCCCAAAACTCCTGAAGTTCCTCCT
GACAATGAATTCGAGAAGCGTATAAGGCCTGAAGTCATACCAGCAAATGAAATTGGTGTG
ACATTTGCTGATATTGGTGCCTTGGATGAACTCAAAGAATCTCTTCAGGAGTTGGTGATG
TTGCCCCTAAGGAGACCGGACCTTTTCAAAGGTGGCCTTTTGAAGCCATGCAGAGGAATA
CTGCTATTTGGGCCTCCTGGCACAGGAAAGACTATGTTGGCGAAGGCCATTGCAAGAGAA
GCTGGAGCAAGTTTCATAAATGTGTCTATGTCCACAATTACTTCAAAATGGTTTGGAGAA
GATGAGAAAAATGTCCGTGCCTTGTTCACTCTAGCAGCTAAGGTCTCTCCCACTATTATC
TTTGTGGATGAGGTTGATAGCATGCTTGGCCAGAGATCAAGAGCCGGGGAGCATGAAGCG
ATGCGGAAAATAAAGAATGAGTTCATGACTCATTGGGATGGGTTACTAACAAAAGCAGGT
GAAAAAATTCTTGTTCTTGCTGCTACCAATAGGCCATTTGACCTTGATGAAGCAATCATT
AGGCGTTTTGAGAGAAGAATTATGGTTGGTTTACCATCAGTAGAGAACAGGGAAATGATC
ATGAAAACTCTATTGGCCAAGGAGAGAGTTGATGACGGAATGGACTTCAAGGAGCTGGGG
ACAATGACTGAAGGTTACTCTGGAAGTGATCTCAAGAATCTATGCACTACTGCTGCATAC
CGGCCAGTTAGAGAGTTGATACAGCAAGAAAGACTCAAAGACTTGGATAAGAAGTGCAGA
GCTGAGGAAGCTAAGAAAGCTGGAGTTGCTCCATCTACAGATGCAGATAAAGAGGATAAG
GTGATCACTATCCGGCCTTTGAATATGGCAGACTTCAAAGAAGCCAAAAAGCAGGTTGCA
GCTAGCTTTGCAGCTGGAGGAGCAATAATGAGTGAGCTAAAACAATGGAATGAGTCATAT
GGGGAAGGAGGATCAAGGAAAAAGGAGCAGTTATCTTATTTTCTGTAGGATAGTTAAATT
TCATCTTCCTGCACCCTTCTCGACCTACCATACAGTTTACGTCTTCACAAATACAAGATG
TTAACCAAAGAAAGTAGTTGTTAAGGGGTGATAAGTAGTACTTCTCATGTTCATTAGAGT
ACCTAATGAACTGGCTGGTAGTAACCGAGTCTTGCTGACCTGTTTGCTTCTGGATTTAAT
TGTAGTTTTATGTTGTAGGTTGGAAATTGTTGTTGTTCTGTTGTTGTTTCTGTGATATTT
AGATTGTACACGTCGAATGTACTATATTGGTTGTTTCCTGTTTAAGACCAAAGGGTAGGG
AGGAGGAAGAGACTTGAGTCGTTTTATCTTTACCCCTTCTTTGCAAGTGCTAAAGAGGAA
GCCAACCGCTTGTACTTCTTTCTCTCAACAAATTGACAGTGGTGTG
