Microarray Probes on PGSC0003DMT400031685
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10766_PI426222305 |
JHI_St_60k_v1 |
GTCTAGTGTGTTTTTCTTATGGGATGAATGGACATATTTAAGCTCTATTTACTCCCAAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031685
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031685 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G64380.1 |
+3 |
4e-55 |
189 |
153/319 (48%) |
Integrase-type DNA-binding superfamily protein | chr1:23890981-23891988 REVERSE LENGTH=335 |
Transcript Sequence (1432 bp)
>PGSC0003DMT400031685 1432 pgsc_dm_v3.4
TCAAAACTCAAAAAACTATCTTTCCTCTAATTATCTCTCTTTCTTTTATAGCTCTCTCGA
GTTTTCGCAACTTAATCATAGAAACAAAATTGACCTTTTCGAACTCTGTCTGTAACTCAC
TAGAGGCCTCGGATTTCTTCATTGATCCTTATATTTTTCTCTGGATCAGTCAAAAAAGGG
GCAGTTTTTTTAGCACCCCTGTTTCCTCCCCTGTTTTCCTCTGTTTTTATGAAGTTATAA
ATATGGACAGAAATCAAGAAAACAACTCTATGACTACCATATTTGATGAGGCTGCTAGAA
TTCGATCTTCGTTATCTCAACTAATTCTAACAAGTGGTACAAACACATTCGATACGATTT
TTTCTCATTGCCAAGAAAATAACCAAATGACTAATAGTCCTGTTTTTGAGCCTTTAGGTA
CTTCAGTCTACCTCAGACAAAGAGATTTGCTACACAAATTCTGTCAAGAAAACATAGCAA
ATATCCCAATACCAACAACTTCCAAAACAATCCCTTTTCGAAACTCTTTGTATACACAGA
GTTACAAGTTTCCAGAGAAGAAAAAACTATACAGAGGAGTAAGACAGAGGCATTGGGGAA
AATGGGTTGCTGAGATAAGACTTCCACAGAATAGAATGAGAGTTTGGTTAGGTACTTATG
AAACTGCTGAAGCTGCGGCTTATGCTTATGACAGAGCAGCTTATAAGCTTCGTGGCGAAT
ATGCAAGATTGAATTTTCCTAATCTTCGTGATCCGAGTAAGTTGGGATTTGGAGATGGAG
AGAAAATGAATGCTGTGAAGAATGCAGTGGATGCTAAGATTCAAGCTATTTGTCAGAAGG
TGAAAAGGGAGAAATCTAAAAAGGCTGCTAAGAAAAAGAGTGAAAATGAGAGTAAAGTTA
AAGAAACTATGGATTCATCATCTTCTACTACTACTACAACTACTACGACTTCTATGATTT
CACCAAGTGTTTCTGAAGATGGATTATGGAAAAGTGAGGATTCAACTTGTTCTGTTTTTG
GTGATTGTTTGAAGGATCCATTAATGGAGTCTGAGTTTGATAGTTGTTCACTTGCAAGAA
TGCCTTCTTTTGATCCTGAGTTGATATGGGAAGTACTTGCTAATTAGGGCACGACTAAGT
CCAAGATGAGCAAAACCATCATGGTTAATTAGGAGTTGTTGTTATTGGGATTTAGTTGGT
ACCATTTTATGTTGTGGGAAAATGTAAATGGTTAATTTTGAAGATTTAGCTATATCTATC
TTATGACTACTACTACCTTTGTCAAAGTTAAGCAGTGATGAATGTCTTGAGTTTGTCTAG
TGTGTTTTTCTTATGGGATGAATGGACATATTTAAGCTCTATTTACTCCCAAGTATATGT
ATCAAATATATTGGGGTTTTGTTATTTTTAATGATATTAGTTATGTTTAAAC
