Microarray Probes on PGSC0003DMT400031553
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_52724_PI426222305 |
JHI_St_60k_v1 |
GGGATTAGGGAAATATTTATGTTAACAATACAAGGTGCCAACTAATTTTTGGCTAGGGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031553
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031553 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G11660.1 |
+1 |
6e-94 |
294 |
177/331 (53%) |
winged-helix DNA-binding transcription factor family protein | chr4:7043006-7044227 FORWARD LENGTH=377 |
Transcript Sequence (1571 bp)
>PGSC0003DMT400031553 1571 pgsc_dm_v3.4
CCATCAAAATATTTTCTTTATTAGCCATTTGTTCTTTCTCCCTCCTATCCTACTCTCCTC
TTAAGAAACTTCTAGAAACAAAAAAACGCAAATTTCTCAATTTTCTCGTCTTCTCGATCT
GTTTAGAAGAGGTTTGGATCTGAATTAGCAGCAACGGTGGAAGCCATGGTGCCATCGTCT
ATTGAACATTCCGGCGAATCTGCCTCCGGGGAGAATCAGAGATCTCTTCCGACGCCATTT
CTGACGAAAACTTACCAGCTTGTAGATGATTCTGCCATGGATGAGTTGATCTCGTGGAAT
GACGATGGAACGACATTCATTGTTTGGAAACCTGCTGAGTTTGCTAGGGATTTGCTTCCG
AAATATTTTAAGCATAATAATTTTTCCAGTTTTGTTCGGCAGCTTAATACTTACGGATTC
AGAAAAATTGTACCTGATCGATGGGAATTCGCAAATGACTGTTTCCGTAGGGGTGAGAAA
GGACTACTTCGTGACATTCAACGCCGGAAAATCTCACCGGCATGTACCGTCGTGAGTGCG
GTTGTTGCACCAGCAGTAGCGGTGAATGCAGCACAAGCAGTGACGGTAGCGGTAGCACCG
GCTGTGAGGATGGTTTCTTCGTCGAATTCCGGTGATGAACAGGTGTTATCATCCAACTCA
TCGCCTGCAGCTACGGCAGCGGCGATGTTAAGGACCACCACGTGTACGACGACGCAGGAA
CTTATAGAGGAGAACGAGCGGTTGAGAAAGGAGAACGCGCAACTGAATCAGGAATTGAAT
CGGTTGAGAAGTTTATGCAATAACGTATACAATCTGATGTCCAATTACTCGGTGAATCCG
GCGGATATACCGGCAAGAATACCGGAAGGACGAGCTCTGGAATTGCTTGACGGCAGCGGT
GCAGCCTTCACAGCGGCGGAGGAAGATATAAGCCCACGGTTGTTTGGTGTATCAATTGGG
GTAAAGCGCGTGAAGAGAAGCAACGAAGAAGAATCTGATACAGTTGAGGATCAGGATCAA
GTACAACCGCATGGATCAGACATGGAATCAGAGCCGTTGGATTCAGGAAGCGCTCATCAT
GATGATCAACCATGGATCTATCGATTAGATTTAGGGTGATGATTTGTCACTCAGAACAAG
TCGGTCCCTTGTAGGTGGGGTCCACAGAAGCACTTGGGTGTTGATGAACAACACGTATAC
AATGGAAGATTGTTGGTTGTTTCTGGTGGTTTCTAGAAGAAGTGAGAAATTGAGTCCAAT
GGTTTTTAGAAAAGGTCACAATATTAGAAAATTATAAAAGGCCCCAAAAGAGGTGGAAAA
GGAGAAAAAAAGTGGCTTTTTAATATGATTTCATAATTGGATTGGAAAAATAGAGGGAGC
TGAGCTGGTAGGTTAAAAAAGATGATTAGTCAATGTTTTAATTAGTTGGGATTAGGGAAA
TATTTATGTTAACAATACAAGGTGCCAACTAATTTTTGGCTAGGGAAATTGTTTGTGCAT
AATTGAAACATTAATAATGTTGTAACTTTATGTTTGAAGTACTTGGTAAATTTACTGAAT
ATTTGCTCTTA
