Microarray Probes on PGSC0003DMT400031142
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50441_PI426222305 |
JHI_St_60k_v1 |
GTTTCCAAATTCCATCACAATGATGCTTTTGAGTTACTCAGTACTGAAAACAGATCCGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031142
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031142 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G46530.1 |
+1 |
3e-139 |
445 |
294/809 (36%) |
NB-ARC domain-containing disease resistance protein | chr3:17130739-17133246 REVERSE LENGTH=835 |
Transcript Sequence (3404 bp)
>PGSC0003DMT400031142 3404 pgsc_dm_v3.4
ATTTTCCAATATACATACAACCTCCTCTTTTTTTCAATCAAAACTAGTTATTCCTAAAGA
TGGCTGATGCCTTTGTGTCATTTGCAGTTCAAAAAATTGGGTGATTTCCTCATTCAACAA
GTTTCCCTGCTTACAAATCTGAGAGATGAAGTTAGATGGCTGAGAAATGAGTTACTCTTC
ATACAGTCTTTCCTCAGAGATGCAGAACTAAAGCAAAGTGGAGATCAAAGAGTTCAACAA
TGGGTGTTTGAGATCAACTCTATTGCTAATGATGCTGTTGCTATACTTGAGACTTATAGC
TTTGAGGCTGGTAAACGTGCTAGTCCTCTCAAGGCTTGCGCTTGCATATGTAGGAAGGAG
AAGAAATTCTACAATGTTGCCGAGGAGATCCAATCACTCAAGCAACGAATCTTGGATATC
TCTCGCAAACGAGAGACTTATGGTATTACAAATATCAATAGTACTAATGCAGGAGAAGGG
CCAAGTAATCAGGTTACAACATTGAGGAGAACTACCTCATATGTGGATGACCACGATTAC
ATTTTTGTTGGCTTAAAGGAGGTTGTACAAACATTGCTAGTTGAACTTCTCAAAGCAGAG
CCTCGTCGAAGCGTCCTCTCCATTTATGGAATGGGGGGCTTAGGCAAGACCACTCTTGCG
GAAAAACTCTACAACAGTCCTGATACAGTCTCTAGCTTCCCTGCACGCGCTTGGATATGT
GTCTCTCAAGAGTTCAAGAAAATGGATCTTCTTAGGAATATCATAAAATCCATCCAAGGT
CGCACCAAGGAAACTCTTGATTTGTTGGAAAGGATGACAGAAAGAGATCTTGAAATTCAT
CTTCGTGATCTATTGAGAGAACGCAAATACCTTGTGGTGGTTGATGATGTATGGCAGAGA
GAAGCATGGGAGAGTTTGAAAAGAGCATTCCCGGATAGCAAGAATGGCAGCAGAGTCATT
ATTACCACGCGCAAAGAGGAAGTCGCTGAAAGAGCAGACAACATAAGTTTTGTTCATAAA
CTTCGTTTCCTAAGTCAAGAAGAAAGTTGGGATCTCTTTTGTAGGAAACTACTTGATGTT
CAAGCAATGGATCCACATATGGAACGTTTAGCTTTAGATATGGTGGACAAGTGTAGAGGC
TTACCTCTTGCAATTGTTGTATTGAGCGGACTACTTTCACATAAAAAGGGGCTAAACGAA
TGGAAAAAGGTGCAAGATCACCTTTGGGAGAACATTAAACATGATAAATCTATTGAAATC
TCTAACATACTATCCTTAAGCTACAATGATTTGTCAACTGCGCTCAAGCAGTGTTTTCTC
TACTTTGGTATTTTTCCAGATGATCAATTGCTCGGGGCTGATAACATAATACGGCTGTGG
ATGGCCGAGGGTTTCATACCCAGAGGAGAAGAAAGAATGGAGGATGTCGCTGAAGGCTTC
TTGAATGAACTGATAAGACGAAGCTTGGTTCAAGTGGTGGATACGTTTTGGGAAAAAGTT
ACTGAATGTAGAGTTCATGATTTACTCCATGAACTTGCGATACAAAAGGCATTGGAGGTA
AACTTCTTTGACATTTATGATCCAAGAAGCCGCTCCATATCTTCTTTATGTATCAGACAT
GTCATTCATAGTGAAGGAGAAAGGTACCTCTCACTTGATCTTTCTAACTTAAAGTTGAGG
TCAATTATGTTCTTCGATCCATATATTTGTAATGTGTTCCAACATATAGATGTGTTCCGA
CACATATATGTGTTGTACTTGGATATTAATGAAGGTGGTGTTATACCTGATGCCATAGGG
AGTTTGTACCACCTCAAGTTGTTAAGATTGACAGGTGGTATCCGTCGTCTTCCTTCGTCT
ATTGGCAACCTTAAGAATTTACAGACACTTTGTGTCGGAGGCTTATGCGAATTATCCAGC
GAAACAGCTGAGCTAATAAATCTAAGACATTTAGAAGCTGAGTATTCAGAACCTCTGGTA
CGTATTAGCAATCTCACTAGTCTTCAAGTTCTTCAAGGTGTTAATTGTGATCAATGGAAA
GATGTTGACCCTGTTGATTTAGTCAATCTTCGAAAATTAAGCATGCATGATATTACCAAA
TCTTACTCCCTAAACAACATTAGCAGCTTGAAAAACCTTAGCACTCTCACATTGTTTTGT
AGAGGTGGTGAATCATTCCCATCCCTTGAATTTGTTTATTGTTGTGAAAAGCTCCAGAAA
TTGAGGTTAGAAGGGAGAATAGAGAAACTGCCTGATCTGTTTCCAAATTCCATCACAATG
ATGCTTTTGAGTTACTCAGTACTGAAAACAGATCCGATGCCTATTTTGGGAATGTTGCCA
AACCTAAGGTATCTCTATTTGTTTAGAGTTTATAAAGGAAAAGAAATAATATGCAGTGAT
AACAGCTTCAGTCAACTAGAGATCCTTAGTCTTTATGATCTTGAGAACTTAGAAACATGG
CATTTAGCCACAAGTGCAATGCCTCTCATTAAAAGTTTTTGTATCGATGACTGTCCAAAT
TTAAAGGAGATTCCTGAGAGAATGAAAGACGTGGAGCTGTTGAAGATGTGAAGCTTTTCA
AGAATATATATATATCATGTCTTCATAATCGTAGAGGTATTGATGCCAAGCACATTGGTT
ATTAGTTGAGTGGTTTTAGTGTTTCATTTCTTATTATTGTTTTAAGCTTTTTGAGTGAGT
GTAATTGGTTTGAAGATAATTGTTTTTGCCAAAAATGATTTTGTGACCGTATTAAGAAAT
CTTACTCCCTAAACAACATTAGCAGCTTGAAAAACCTTAGCACTCTCACATTGTTTTGTA
GAGGTGGTGAATCATTCCCATCCCTTGAATTTGTTTATTGTTGTGAAAAGCTCCAGAAAT
TGAGGTTAGAAGGGAGAATAGAGAAACTGCCTGATCTGTTTCCAAATTCCATCACAATGA
TGCTTTTGAGTTACTCAGTACTGAAAACAGATCCGATGCCTATTTTGGGAATGTTGCCAA
ACCTAAGGTATCTCTATTTGTTTAGAGTTTATAAAGGAAAAGAAATAATATGCAGTGATA
ACAGCTTCAGTCAACTAGAGATCCTTAGTCTTTATGATCTTGAGAACTTAGAAACATGGC
ATTTAGCCACAAGTGCAATGCCTCTCATTAAAAGTTTTTGTATCGATGACTGTCCAAATT
TAAAGGAGATTCCTGAGAGAATGAAAGACGTGGAGCTGTTGAAGATGTGAAGCTTTTCAA
GAATATATATATATCATGTCTTCATAATCGTAGAGGTATTGATGCCAAGCACATTGGTTA
TTAGTTGAGTGGTTTTAGTGTTTCATTTCTTATTATTGTTTTAAGCTTTTTGAGTGAGTG
TAATTGGTTTGAAGATAATTGTTTTTGCCAAAAATGATTTTGTG
