Microarray Probes on PGSC0003DMT400030385
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39358_PI426222305 |
JHI_St_60k_v1 |
GATGAAAGGCCCTTTGTCAATAATGTCTGTTTTCTCAAGTATTTTGGTTTGTTAGGAGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030385
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030385 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G46230.1 |
+3 |
9e-63 |
198 |
106/142 (75%) |
heat shock protein 17.4 | chr3:16984263-16984733 REVERSE LENGTH=156 |
Transcript Sequence (845 bp)
>PGSC0003DMT400030385 845 pgsc_dm_v3.4
TAGATAACACTCGAATGGCTTGTTCTCAGATTCATCCCTATAAATATCACGGACACTTAT
TCTAGTTCATCATCAAGCAAATCAAACACTAAAATCAAAAGTTAAAAAATCCTCTGTTTT
CTTCAAACACAACAAAGTTCCCAAAAATGTCTCTGATTCCAAGCTTCTTCGGTGGTCGCA
AGAGTAACATTTTCGACCCATTTTCCCTTGACTTATGGGATCCATTCCCAATTTCAACCA
ATGCTCCATCCTCTGCTCGTGAAGTCTCTGCTTTTGCAAATGCAAAAATCGATTGGAAAG
AGACCCCAGAAGCTCACGTCTTCAAAGTGGACGTTCCCGGGATAAAGAAAGAGGAAGTGA
AAGTCGAAGTGGAAGAAGGAAGGATTTTACAGATTAGCGGTGAGAGAAGCAGAGAGCAAG
AAGAGAAGAACGATCAGTGGCACCGTATGGAGAGGAGCAGCGGTAAGTTTATAAGAAGAT
TCAGGTTACCGGAGAATACGAAGACGGGAGAAATAAAGGCAGCGATGGAGAATGGGGTGC
TCACTGTGACTGTTCCTAAAGAAGAAGAGAAGAAACATGAAGTGAAGGCCAAAGAAGAAG
AGAAGAAACATGAAGTGAAGGCCATTGACATTTCTGGTTAAACAAGTGTTTGATGAAAGG
CCCTTTGTCAATAATGTCTGTTTTCTCAAGTATTTTGGTTTGTTAGGAGATTAAGCTTTT
AATTTGAATTGTGTATGTGTAATTGTTAAAGATTGTGGTCTTCTTCTACTTGCATTTGTA
AACAAAAAATTGTTGTCAGAGTTTAATTAATGAAAAATTTCATCCCGTTATAAAATGGAT
GTCCA
