Microarray Probes on PGSC0003DMT400030328
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40009_PI426222305 |
JHI_St_60k_v1 |
CCTGTCTATGAAGCAACAAATCTTGGTACTAATTATCTAGCCATTGATGCAAATGGTAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030328
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Source Transcript PGSC0003DMT400030328 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G13980.1 |
+1 |
2e-12 |
64 |
33/54 (61%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink). | chr3:4619189-4620262 REVERSE LENGTH=357 |
Transcript Sequence (519 bp)
>PGSC0003DMT400030328 519 pgsc_dm_v3.4
ATGGATTCTTCTCTAGCAAAGGAAAAACCTAAACATGATGAAGATGGTTTTAAGAAGGCA
AAGTCAAGAGGTTTGAAGATTTATAGAGAATTAAAGAAAGCTAAGCAACCTATTTCTCAT
GGAAGTAGACTATCAAGTTTCTTGAACTCACTTTTTACAAATGGAAAAAAAACAAAAAAT
TCCTCAAATGATAATGAGGATAGAAAAATAAAATCAGCAAATGCATCAACTTGTTCTTCA
TTTTCTAGATTAAGTTTAAGCAAAAATATTATTAGTACTCCATGTGGACAAAATAATTAT
GACATGGACCAACAAAATGTGGAGGCTATAAATGGAATTAATAGAAATTATGTTCATGAA
GAATATGAAGATGAAGATGATGATGAAGGTGCAAGTTATGCAAGTTCTGATTTGTTTGAG
CTTGATATCTTTTCTTCCATGGGATTAATGGAATTACCTGTCTATGAAGCAACAAATCTT
GGTACTAATTATCTAGCCATTGATGCAAATGGTAATTAA
