Microarray Probes on PGSC0003DMT400030193
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8267_PI426222305 |
JHI_St_60k_v1 |
TCCTTCTCCTAGTTGGATCTTCAAGGCATGGGAAGCATCCGATGATGAAATAGTTGATGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030193
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030193 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G10090.1 |
+1 |
1e-119 |
384 |
195/394 (49%) |
Early-responsive to dehydration stress protein (ERD4) | chr1:3290572-3295271 REVERSE LENGTH=762 |
Transcript Sequence (2655 bp)
>PGSC0003DMT400030193 2655 pgsc_dm_v3.4
ATGAAGCTATCTGCACTCTTGACTTCTGCTGGAGTTAATATTTCAGTCTGTGTGGTGCTG
CTCATTCTGTATTCCTTACTAAGGAAACAACCAACTTTTGTAAATGTCTACTTCAGCCAG
AGATTTGCTCGGGTACGAACAAGACAGCTCGGTGGCTTTAACTTTGAGCGATTTGTTCCT
TCTCCTAGTTGGATCTTCAAGGCATGGGAAGCATCCGATGATGAAATAGTTGATGCCGGG
GGCTTGGATGCATTCGTGTTGGTGCGGATGATTGTTTTCAGTTTCCGAATATTCTCCATT
GCAACTACTCTAGGCCTTTTCCTCGTGGTGCCTCTTAATTATTTTGGTCAAGATATAAAG
CGTCAGCAAATTCCTGCCGAGTCATTGGAGGTATTCACCATTGTGAATGTTGAGCCAGGG
TCAAGATGGTTTTGGGTTCACTGCCTCGCACTGTATATCATATCCTGCTCCGCTTGTCTT
CTTCTTTACTCTGAGTACAAGAGTATCTCAAAGAAGCGGCTGGCATACTTCAGTTCATCA
CTTTCCCGCCCAAGTTACTTCACTGTTCTGGTCCGTTCTATCCCAAAGTCTAAGGAAGAA
TCATACAGTCGTTCACTGGAAAAATTCTTCATGAATTACTACGCATCAAGTTATCTATCT
CATCAAATTGTCTATCGCTCTGGCTATGTCCAGAAACTGCTGATTGATGCAGAGGAGGTG
TTCAGGATGCTTAAAACAACCCAAAAGGAGCTTATGATATGTGGCATATGTGGAGGAGCT
ACTTCGTCTTTCAAGATGATTACCAATGAGTGTGATCGTGATGAAGGAAGAGATGATTGT
GATGGTTCAGATTTGAGAAAAAAGGAGTCTGCAGCTGCTTTAGTTTTTTTCAGGAATCGG
TATGCTGCTTTAGTTGCTTCGCAAGGTCTTCAATCTTTGAATCCCATGTCATGGGTTGTG
GATCCTGCTCCAGAACCAGATGATATGTACTGGTCAAACATTTGTGTTCCTTACAGACTC
CTTTGGATTCGTAAAATTGCGCTTTTAGTGGCCTCTATTCTTTTTGTGGCATTTTTCCTT
GTGCCTGTTTCACTAACACAAAGTCTCGTTCACCTCGACAAGCTGCAAAAGACATTTCCA
TTTCTTAGAGGATTTTTAAAGGGATTCAATAAAATTTTTAAGGATGTGAACAATCTACTT
TCAACGGCTGTGCCATCAACGGCCACCTTCTTTATGACTTATGTTTTGACTTCTGGCTGG
GCAAGTCTGTCTGTTGAACTCTTACAACCATTCGGTCTCATCTGCAGATTGTTCTCCAGG
TTTATTATGAGAAACATGGATGGTTCATGTCATGGAACACTGACTTTTCCATACCATACA
GAAGTTCCAAGGATCCTCCTATTTGGCCTCTTTGGTTTTGCATATGCCATTTTGGCACCT
GTAATACTGCCATTGTTGGTAGTTTATTATTCCATTGCTTACCTCGTATATCGTAATCAG
ATCCTCAATGTATATGTGACAAAATATCAAACTGGTGGAACCTATTGGCCTATTGTGCAC
AACACGACAATTTTCTCAATGGTGCTGATGCAAATTATAGCTTTGGCGGTTTTTGGATTT
AAAAAATCTTCATCTACATCAAGCTTCACTATTCCATTGATAATCTGTACACTCCTCTTC
CATGAGTACTGTAGGCAAAGGTTTGAACCATTGTTTAAGGACCCTCCTGCTCCGATCCTC
ATTGAGATGGATAGGCAGGACGAGGTACATGGGAGGATGAAAGAGACGTATCAACAACTC
ACATCAGCTTATTGTCAGTTCAAATCAACCTTATTTTCACTGGGTAAAGCTGCTCCTGGA
AATGACGAAGAGAACATGAGTATCCATACGGTTCAAGACATACAAGATGTTAATCCAGGG
AAAAGTCCTTCGCATCTTCCTCCATCATGTACATCTGTTGAAATTAAAAGTCCTCATCAT
CCTTTATCACATACATCAAGTCCTCATCTTCTATCACCACACGCGTCTTTGGAAATTAAA
AGTCCGCCACATATTCCATCATCACGTACGTCTTTGGAAATTAGAAGTCCTCCTCATATT
CCTTCATCATGTACATGTTTGGAAGTAAAAAATCCTTCTCATCTTCCTTCATCACATACA
TTTTTAGAAATTAGAAGTCCTCACCTTCCTTCATCACGTACGTCATTGGAAATTAAAAAT
CCTTCTCATCGTCTTTCACCACGTACATCTTTGGAAATTAGACGTCCTCATCTTCCATCA
CCACGTACATCTTTAGAAATTAGAAGTTCCTATCTTCCTTCACCACGTACACCTTGGGAA
ATTAAAAGCCCTCATCTTCCTTCGTCAAATACATCTTGGGAAATTAAAAATCCCCTTCTT
CCTTCACCGCGTGAATCTTCAGAAACTAAAAGTCCTCGCTCTGCTTCACCGTGTAAATCT
TCACAGATTAAAAGTCCTCTTCGTTCACCGCGTGAATCTTTGGAAATTAAAAGCCCTCGT
CGTGCTTCACCTCGTAAATCTTCAGAAATTAAAAGTCCTCGTCTTTCTTCACCAGGTACA
TCTCTGGAAATTAACAGTCCTCTTCATCCTTCATCAAGTACGTCTTCAGAAATTGAAGAA
TCGCGTGGCAAGTAG
