Microarray Probes on PGSC0003DMT400030161
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8036_PI426222305 |
JHI_St_60k_v1 |
ATGGTGGATAAATCGGCATTTGTTATGAGCGTTTTGATATCAATGGTGGAAGCGAGGGCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030161
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030161 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G01400.1 |
+3 |
4e-180 |
522 |
273/343 (80%) |
ARM repeat superfamily protein | chr3:151920-152987 FORWARD LENGTH=355 |
Transcript Sequence (2185 bp)
>PGSC0003DMT400030161 2185 pgsc_dm_v3.4
ATACTCCTATATTTTAAGGTTTTATATCATTTTTTCCCCTATTTTTTCATTCGATGTCTG
AAATTTACATTAGGGTCCGACTAAGTTCGAATATGCATATTGAAAGGTAAAGCATTCCCC
AACAAAGGAAACTTCGTATCCAGAGACACTCGAACTCAAAAATTATATTCCTTGAAGTGA
AGAATTGAAAGTGGTTGTTAGTTAGATAACACGTATGTAATGTACATCTTTAGTGTTCTG
CTCATGGGAAGAGGGATGCGGGAAAGTGAATCTTCTCACTTATGCTCACTTTTGTTTTAG
AAGTCAGATTGAATTTACATATGGTGCAATCAACAGAAGGGTTCCAAACCTCTAAAAGTC
GAGGCTGATTTAACGTCACAACTTCCCCTTAGCGCACAACTAAATGATGCACGGATTGGA
AATGCGGATTTGTAAGGATCACAACTAGATGTTGTTCAAATAAATAAGGGTATATTTGGA
TCAACTATTGCAGGTGCACGATAAAGGTATATCTGAGCTAAGCTATTAACGAATGATATA
TATTTGTTCGATTAGTAAAAATAAAATTTTATTTTTAAAATGATAGACAAGTAAAAGAGT
ATCGAATAACGAACCTTCCACTCCCGCATTAAAAGTCGCACGTGCTGTTCCTACTTGGAT
TCTGTACGGTCACCCACGTGTCCATCCCTTTCTCCTAGGCGTTAATCCACGTGTTCTCTT
CTCTCCTTTCTCTTATATCTTCTATTTCCACTTTCTTCAAATTCTCCTCAAAAGCCCATT
AACACACTCGGCCCAAATCAAACTCCACCTACCAAACGCCGTCGTTTCGACTTTCACCTC
TCATTTTCCGATAACACCGGCAAACCTTTGAAAACTCGCCGGAAACATTAACTACCTATT
GCCGGCGACGAAAACAGTTGATGAATTGAATTAGATCATCATAGCCGAAGACAATGGAAA
CAGAAGTTCAATCTAATTTCACTTACATGGGAAGAACATTTACCGGTCTTGGAATTAATG
AATCTTCCTCTGCTTTCAGCGACTGCAATAGCGATAGATCCGGCGAGTTTCCGACGACTT
CTTCTCAAAGCCGGCGGTTATTAATTGCATGTGCGTCGGATAATTATAACTCCGATGAAT
TGATTCAACAACTCGTGTCTGATCTCGAGTCGAATTCTATCGATGTGCAAAAGCAAGCGG
CAATGGAGATTAGGCTCTTAGCGAAGAATAAACCGGAGAATCGTTTGAAAATTGCTAGAG
CTGGAGCGATTAAGCCGTTGATTTCGCTTATCTCTTCCACTGATCTTCAGCTTCAAGAGT
ACGGTGTCACGGCAGTGCTGAATTTATCTCTCTGCGATGAAAACAAGGAGCTTATCGCAG
AATCAGGAGCGATTAAACCGTTAGTTCGAGCTTTGAAAATTGGAAATTCAACTGCGAAGG
AGAATTCCGCTTGTGCTCTGCTTCGATTATCACAAATCGAAGAGAATAAAATCGCGATCG
GAAGGTCCGGTGCGATACCTCCATTAGTGAACCTTCTAGAAGCCGGCAATTTCCGCGGGA
AGAAGGATGCATCAACTGCTCTGTTTTGCCTATGTACGGTGAAAGAGAACAAAATTAGAG
CCGTACAAGCCGGAGTTATGAAACCGTTAGTTGAATTAATGGCGGATTTCAGTTCAAACA
TGGTGGATAAATCGGCATTTGTTATGAGCGTTTTGATATCAATGGTGGAAGCGAGGGCCG
CGGTGGTGGAGGAAGGCGGAATTCCGGTGCTGGTGGAGATCGTGGAGGTCGGGTCACAGC
GGCAGAAGGAGATCGCGGCGGCGATATTGTTGCAGCTCTGTGAAGATAGCGTTTGTTACC
GTACTATGGTGGCTCGAGAAGGCGCAATTCCCCCATTGGTTGCTTTGTCACAGTCTGGTA
CAAATCGCGCCAAACAAAAGGCGGAGACACTGATTGGTCTGTTACGGCAACCAAGATCCG
GTAACGCCGCTGCCACAACACCAGCCAGAGGTTCTGATGTGTCGTTTTGATTGTCTGTCA
ACCACATGTTTTGTCTCCCTCTTTTGTTTTTTTTTCTTTCTTTCTTTTGTATTATAGCTA
CTCAAGATAACCACAAAACATTGTCAAATACAAGGTAAAAAAAAATTGTAAATATCTTTT
AAACTTTGTAAATTTTGGTTGTTTT
