Microarray Probes on PGSC0003DMT400030117
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8216_PI426222305 |
JHI_St_60k_v1 |
ACACTTTCCTTGTCTATGCTTGTCCTGTTGGAAATTATTTCAAGATGGATGAGGCAGAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030117
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030117 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G10070.1 |
+1 |
2e-55 |
182 |
104/205 (51%) |
branched-chain amino acid transaminase 2 | chr1:3288255-3290164 FORWARD LENGTH=388 |
Transcript Sequence (510 bp)
>PGSC0003DMT400030117 510 pgsc_dm_v3.4
ATGGATGAGGCAGAATTAAGAAGTGGACCAATTCTTGGTTTGGCTCCAGCACCAGAGTAC
ACTTTCCTTGTCTATGCTTGTCCTGTTGGAAATTATTTCAAGGAAGGGACATCGTCATTG
AACTTGTACGTTGAGGAAGACCTTCATCGCGCCTCGCGTGGTGGAGCTGGAGGTGTCAAA
AGCATTACTAATTATGCCCCGGTTTTAAGAGCCATAAAAAGTGCAAAAGACAGAGGATTC
TCAGATGTATTATACCTTGACTCTATAAATAAGAAATACATTGAAGAGGTTGAAGAACGT
TTAATTGAAGTGGAGGAATTGAATAATGTTGATGAAGTATTTTGTACTGGAACTGCTGTT
GGTATTGCTTCAGTAGGTAGCATCACTTATAAAGGCAAAAGGATTGAGTACAAGGAAAAG
CTAACAAGTAAGAAATTGTGCTCAAGATTAATTGAAATTCAAAGAGGTATTATTGAGGAC
AAGAGGGACTGGATCGTAGAGATTTATTGA
