Microarray Probes on PGSC0003DMT400030111
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8094_PI426222305 |
JHI_St_60k_v1 |
TGCCACCATTCTCATTGAAATACAGGGCAGTAGTAAGGTCAAATTGTTTTCACAAGGAGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030111
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030111 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G49630.1 |
+1 |
0.0 |
691 |
349/474 (74%) |
amino acid permease 6 | chr5:20142681-20146441 REVERSE LENGTH=481 |
Transcript Sequence (1810 bp)
>PGSC0003DMT400030111 1810 pgsc_dm_v3.4
CATTTTTTAATTTCTACACTTATATATATGTTCGTATTTGTCCCCTCTTTTATCTTCTTT
TCATAAACCTCTCTCCATCTTCTTCTTAACTCCAAACACCACACAATATAACAAAACTCT
TAAAAAAAAATTATGGCATCAGAATTTGAGAAGAATAGTACCAATATGTATGTAGAACAA
TCACCAAAAGGACTAGAAAATGGACAAGTTCAGAAAAATGTTGATGATGATGGACGCGAA
AAAAGAACAGGGACCGTGCTAACGGCGAGTGCTCATATAATAACTGCAGTGATTGGGTCA
GGAGTGTTGTCACTAGCATGGGCAATGGCTCAGCTAGGGTGGGTGGCTGGTCCTGTTATT
CTCTTCCTCTTTTCTTTCATCACCTATTTTACTTCAACATTGCTCGCCGATTGTTATCGA
TTTCCGGGCCCCGGCTCCGGCAAGAGAAACTATAGTTACATGGAGGTTGTCCGCTCTCAC
TTAGGAGGATTTAAAGTGCAACTTTGTGGAATAGCTCAATATGGTAATTTAGTAGGAATT
ACAATTGGATACACAATTACTGCATCTATTAGTATGAAGGCAGTAGTAAGGTCAAATTGT
TTTCACAAGGAGGGGCACCAAGCTAGTTGCACAGTATCAAATTACCCATATATGGTTATT
TTTGCAATAATACAAATAATTCTAAGCCAAATACAAAATTTCCATAAACTTTCATGGCTA
TCAATTCTTGCAGCAGTTATGTCTTTTGCTTACTCTCTTATTGGTCTTGGACTTTCCATA
GCCAAAGTTGCTGGTGCTGGGCATCATGTGAAGACTAGCCTAACAGGGACAATAGTTGGT
GTAGACGTGTCAGGATCTCAGAAAGTTTGGAGATGTTTACAATCTATTGGAGATATTGCC
TTTGCTTATGCTTTTGCCACCATTCTCATTGAAATACAGGACACATTGAGATCACCACCA
GCAGAGAACAAAGTTATGAAGAGAGCATCACTTGTTGGAGTTTTTACCACAACTTTATTT
TATGTGTTATGTGGTACAATTGGCTATGCAGCCTTTGGCAACAATGCTCCTGGAAATTTT
CTCACTGGTTTTGGTTTCTATGAACCCTTTTGGCTAATCGATTTCGCTAACGTTTGCATC
GCCATCCACCTCATCGGAGCTTACCAGGTATTTTGCCAACCAATATATGGCTTTGTGGAG
GGTCGTTGTAGTGAAAAATGGCCAGACAACAAATTCATTAAATCCCAACATGACATAAAC
ATCCCATGGTTTGGTGTTTACAATCTTAACTATTTTAGGATGCTGTGGAGGACAATATAT
GTTATAATAACAGCAATAATTGCTATGATTTTCCCATTTTTCAATGCAATATTAGGCTTA
ATTGGGGCAGCTTCATTTTATCCATTAACTGTTTATTTCCCAATAGAAATGCACATTGCA
CAAAGGAAAATACCTAAATATTCATTCAAATGGATATGGTTACATATATTGAGTTGGGCT
TGCTTGATTGTGTCACTTGTTGCTGCTGTTGGATCCATAGAAGGCCTTACACAAGATCTC
AAGACATATAAGCCCTTCAAACCTCAAGATCATGATTGAGGAAATTTCATAGCGGTACTT
TTTTTGAGTCCTGATTATCAATTATAGCGATAGTTTGGCTAATTATAAATAGAAAATAGT
GTATAATTAGTTTTGATTATCATAACTATGTATGTAGTAGTAGTATTTTCAATAAGAAGT
TAAAGTTTCTTGAAACTGAGTGGTTTTATGTAACTCTGACAAATTTTGTATAACACGTTA
TACTATTACG
