Microarray Probes on PGSC0003DMT400029318
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25638_PI426222305 |
JHI_St_60k_v1 |
GGGACTGGAATTTGTAACTTAGCCCAGCTTGAATGTTTGACATTGATTCCTAATAATATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400029318
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400029318 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G54160.1 |
+3 |
3e-128 |
380 |
200/364 (55%) |
O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363 |
Transcript Sequence (1413 bp)
>PGSC0003DMT400029318 1413 pgsc_dm_v3.4
CCCCATTATACATCATCTTGAGGCCTAACAAAACACTCCAAAAAAATAAAATTACATTAA
CTCTTAGCTCATATTTCTTGTTCATCTCTAAGGTTTTTTCAGCCATGGGATCCACAGCAA
ATATCCAGTTACCAACACAATCCGAAGACGAAGAGCGTAATTGCACGTACGCCATGCAAC
TACTCTCATCGTCAGTGCTTCCCTTCGTGTTGCACTCAGCGATTCAGTTGGATGTTTTTG
AGATACTCGCAAAAGATAAAGCCACTAAACTATCTGCTTTAGAAATTGTGTCTCACATGC
CTAACTGTAAGAACTCTGATGCCGCTACCATGCTAGACCGGATGCTTTATGTCCTAGCTA
GTTATTCTTTACTCAATTGCTCTGTTGTTGAGGAGGGAAATGGGGTGACGGAAAGGCGCT
ATGGTCTGTCAGAAGTGGGGAAATTTTTTGTACGTGATGAAGATGGTGCATCCATGGGAC
CATTGTTGGCTTTGCTTCAAGATAAAGTATTCATTAACAGCTGGTTTGAACTAAAAGATG
CAGTACTTGAAGGTGGAGTTCCATTTGACAGGGTGCATGGTGTACATGCATTTGAATATC
CAAAATTGGACCCAAAGTTCAATGATGTTTTCAACAAGGCAATGATCAACCACACAACTG
TTGTCATGAAAAAAATACTTGAAAATTACAAAGGTTTTGAGAATCTCAAAACTTTGGTTG
ATGTTGGAGGTGGTCTCGGAGTTAATCTCAAGATGATTACATCTAAATATCCCACAATTA
AGGGCACTAATTTTGATTTGCCTCATGTTGTTCAACATGCACCTTCCTATACTGGGGTGG
ATCATGTTGGGGGGGATATGTTTGAAAGTGTTCCACAAGGAGATGCTATTTTTATGAAGT
GGATCCTTCATGACTGGAGTGATGGTCACTGCCTCAAATTGCTGAAGAACTGCCATAAGG
CTCTACCGGACAACGGAAAGGTGATTGTTGTGGAGGCCAATCTGCCAGTGAAACCTGATA
CTGATACCACAGTTGTTGGAGTTTCACAATGTGATTTGATCATGATGGCTCAGAATCCGG
GAGGCAAAGAGCGTTCTGAACAGGAGTTTCGGGCATTGGCAAGTGAAGCTGGATTCAAAG
GCGTTAACCTAATATGTTGTGTCTGTAATTTTTGGGTCATGGAATTTTACAAGTAGATTT
CCACAACCTACTTGGCTCTTATGATTATGTATTTTTATGGCACTCTGGGACTGGAATTTG
TAACTTAGCCCAGCTTGAATGTTTGACATTGATTCCTAATAATATTTATATTACTACTTG
TTTGTTTCTGTAGTTTGAGAGGATATCATTGTAACGTTTGTCCAAATTTCATTGATATCC
TAGTATTCCTAATAAGTAATATTTATATATTCC
