Microarray Probes on PGSC0003DMT400029242
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25623_PI426222305 |
JHI_St_60k_v1 |
CGTCTTTTCACAAGGATGTAATTTTATACACTTGCTACTATGGAGAGGTGGCAATTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400029242
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400029242 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G79530.1 |
+3 |
0.0 |
569 |
336/426 (79%) |
glyceraldehyde-3-phosphate dehydrogenase of plastid 1 | chr1:29916232-29919088 REVERSE LENGTH=422 |
Transcript Sequence (1673 bp)
>PGSC0003DMT400029242 1673 pgsc_dm_v3.4
CTCCGCTCATTTTCTCATTTCCTTTTTTTTTTTCTTTGTCTAGGGTTTTTGGCAATAGTA
TATATATACAGTTGCATAGAGATTCACCAAACTCTCTCGCATTCATCACAATGGCTTTTT
CTTCTCTTCTCAAACCTACCGCATCCCTTGTTCGACCTTCTCATCGATCTCAGGCATCAT
GTGCAGGACTTCATCACAGTAGTAATTCTGTTAAATTACAATCGTCTGTCTTCGGAGATG
CTGTGACAATTTTGCAATCTTCGTCTTTACAAAAATCTGGTGCCTGCAGTATTCAACCTA
TCAGAGCAACTGCTACTGAGCTGCCTCCAACAGTTCCAAGGTCACAGACTGGTGGGAAGA
CAAGGATTGGTATAAATGGTTTTGGACGTATTGGGAGATTGGTTTTACGAATTGCAACAT
TCAGGGATGATATTGATGTGGTCGCAGTTAATGACCCATTTATCGATGCAAAGTATATGG
CTTACATGCTCAAGTATGATTCCACTCATGGAGTCTACAGTGGATCCATCAGTGTCCTGG
ACGATTCTACTTTGGAAATCAATGGGAAGCAGATTAAAGTCAGTAGCAAAAGGGATCCCG
CAGATATTCTATGGGGTGATTTAGGTGCAGATTATGTTGTTGAATCTTCTGGTGTCTTCA
CAACTATTGATAAGGCCTCAGCACATAAGAAGGGTGGTGCAAAGAAGGTCGTAATCTCAG
CACCATCAGCTGATGCACCTATGTTTGTGGTAGGAGTGAATGAGAAAACTTACAAAGCCA
ACATGGATGTTGTTTCTAACGCTAGCTGTACTACCAATTGCCTTGCTCCCCTTGCCAAGG
TGGTTCATGAAGAGTTTGGCATTGTTGAGGGACTAATGACTACTGTGCATGCAACAACAG
CTACCCAAAAGACTGTTGATGGCCCATCAATGAAGGATTGGCGAGGAGGCCGTGGTGCAG
GACAAAACATCATCCCTAGTTCAACTGGTGCTGCTAAGGCAGTAGGAAAAGTTCTGCCAG
AATTGAATGGGAAGCTCACTGGAATGGCGTTCCGTGTCCCAACACCTAATGTCTCTGTTG
TTGACTTGACTTGCCGGCTAGATAAAAGTGCTTCTTATGATGATGTGAAAGCAGCGTTAA
AGTATGCATCAGAGGGTCCACTTAAAGGCATTTTGGGTTACACAGACGAGGATGTTGTCT
CAAATGATTTTGTTGGCGATTCCAGGTCGAGCATATTTGATGCTAAAGCTGGTATAGGCC
TAAGCAAATCATTCGTGAAGCTCGTCTCCTGGTATGATAACGAGTGGGGTTACAGTAACC
GAGTATTGGACCTCATCGAGCACATGGCGTTGGTAGCAGCCACCAATTAAAATACAAGAT
AATAGTAGCTACTGCAGAGTTTGGCGCAAGCAACCATTTGTATTTGAAAAAGTTGTGGAG
TAGAATGCTCCATTTTGGTTATGGATTGAGTTTCCTTACTGTCGTACTTTAGTTTAAAAT
AATGAACAGTTGGACATGTATGATTACATACGTCTTTTCACAAGGATGTAATTTTATACA
CTTGCTACTATGGAGAGGTGGCAATTTTTTTGCTTAAAAGGAGATCATAAAATTTGTTAA
TTTTACTGCCAAACTTGATTCTCTGATTCATCATGTTTAAGAAGTTTGTCATA
