Microarray Probes on PGSC0003DMT400028658
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2593_PI426222305 |
JHI_St_60k_v1 |
GGTGTGTGTTAATCTCCTTGTCATCCCTTGTTGAAGATAAGTTCTTGATCAAATTAATCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400028658
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400028658 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G38310.1 |
+3 |
3e-85 |
261 |
131/181 (72%) |
PYR1-like 4 | chr2:16050251-16050874 FORWARD LENGTH=207 |
Transcript Sequence (1150 bp)
>PGSC0003DMT400028658 1150 pgsc_dm_v3.4
CTATTTTCTACCCTGTATATATACAACATAATCACACCCATAAAACACAAGGGAGAATAA
ATCATCACCACTTTTTCATTTTCTCTCAATTTTCAAATCAGCAACAAAAAATGCCTCCCA
GTTCTTCAGATTCATCTGTTTTACTCCAACGAATTAGCTCTAACAATACTCATGATTTTG
CTTACAAGCAATCTCATCATCAGTTACAGAGGCGCATGCCGATTCCCTGTTCGACGGAAG
TACCCGATTCTGTTTCCCGGTACCATACTCACACTGTGAGTCCTGACCAGTGCTGCTCCG
CCGTGATCCAGCGGATCTCAGCTCCCGTCTCCACCGTATGGTCGGTGGTCCGCCGATTCG
ATAATCCGCAGGCGTATAAGCATTTTGTTAAGAGCTGTCATGTTGTTGTCGGTGACGGTG
ACGTCGGTACTTTACGGGAAGTCCGTGTGATTTCAGGTCTCCCTGCTGCTAGAAGCACGG
AGAGGCTTGAGATCCTCGACGACGAACGGCACGTCATCAGTTTTAGCGTTGTTGGTGGGG
ACCACCGGTTAGCCAATTACCGATCTGTGACTACGCTCCACACGGAACCGAGCTCCGGCA
ATGGAGCGGTGGCGGAGACGATCGTTGTGGAATCGTACGTCGTTGATGTACCGCCTGGTA
ATACTAGAGAAGAGACATGCGTTTTTGTGGATACAATCGTGAAATGCAACCTTCAATCGT
TATCTCAGATCGCACGGAATTCAAGCAGATGAAAATCTTCGTGAATTTTGAAAATGTATT
GCGGATCAAGTTGCTCTGACTCTTCATTTTTTTCATATTCGTGTCAGATATTTCAAAAAT
ACATACTATAGGTAGTATTTTTGAAGAATTTGATACGCATATATTCATATTTTGAAGAGT
TCGAGAAACAGGTTGCGGAATCGGAATTAATGAAGACAACTAATCGATGATGCTTGTGGT
GATGATCTGATGATATCATATGCGATGCATGATTGTTTCGTTGCACCTTTATTAGGTGTG
TGTTAATCTCCTTGTCATCCCTTGTTGAAGATAAGTTCTTGATCAAATTAATCTTGTACT
TTGCTTAATTAATTTCATACTCTATAATTTTGTCTATATTGTTTTCTTTATCGATTTCTT
TACTATGGTG
