Microarray Probes on PGSC0003DMT400028481
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51710_PI426222305 |
JHI_St_60k_v1 |
CAGAACTCAGTGTCTCACAATGAAATGCATTATGACAGAAAGGGAAGTTTGTAACTTTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400028481
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400028481 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G19390.1 |
+1 |
7e-139 |
436 |
297/766 (39%) |
Wall-associated kinase family protein | chr1:6700772-6703368 REVERSE LENGTH=788 |
Transcript Sequence (2623 bp)
>PGSC0003DMT400028481 2623 pgsc_dm_v3.4
ACCAAAACATTTAAAAATCACAATATGGATCCCACTTGTAAAGTTATTACTTTTTTCGTT
TGTCGAGAAGTGGGGAAGCCTTAGCAGGTCCTATTTCAAAAGTATAATGATGTTTGCAGA
ATTTTGTGTCATCATAAGATATGATTCAACCAGAGAATGAGGCAGTAATACATACCAGTA
TACATGAAGATGCATATAACCATGTGGTCATTTTTCATTCTTCTGATGGGGATGCTTTCT
AAAGAAACAACCCAAGTTTCAGCTATAAGAATATGGTCATCATCAGCAATATTATCTTCA
CAAAGGCCGCGATGCCCAGAAAGATGTGGCAACGTAACCATTCCTTTTCCATTTGGAATA
GGAAAAGAGTGTTGCTTCAATGAAGCATTTGAAGTGAGATGCGATAACAACACTGCTTTT
ATAAATGATTTGTCTGTGCAACACATATCAATGGACTCCATCACTATTTATATTACTTTT
ACTCCTCTCCACTACAACAACTCATCTGGAAAGAACATTTACAATGATTATCTTCAAGCA
AACAGCGACGAGTATTTCAGTATTTCCAACAAGAACAACTTAGTAGCCATTGGTTGTGAC
ATTTATGCTTATGCCAAAGATTTAGACACCGGTAGTAGAGACAGCATTGTAAGTCAATGT
GCTTCTTTCTGTGGCAACTCCACTTATAATGTTTCATCCTCTTCACCTTCATCATCTTAT
TGCACTGGGAATAGCGGTTGTTGTCAGTCTGAATTATCAAAAATAGTACCAAGAGACTTC
AATATGTACATACAAACAATTAACACGGCGGAAACATCTTGGACAACTAGCAATTGCAAC
TATTACTTAGTTGTGGAAAAGGGCAGTTCTGAGTTTGACTTCACTCAGTTACGTGGTAAG
TGCAAACAAGATGATCATTATGAAGGAAGGATGGCGCTGGACTGGGTAATTGGCAATCTT
AGTTGCAACAAAGCCACAAGAATGCCAAAATATGCATGTACAAAGAATAGTAGGTGCATC
GATGATACTACTAGACCTGCTGGGGGATACCGATGCGATTGCTCTTCTGGTTATGAAGGC
AACCCTTACCTCCTTCATGGATGCCAAGACATTGATGAGTGTGCAAGTCCAAAAAGGAAT
CGTTGTCCGAACAATACTCGCTGTGTTAATACTCTTGGCACTTACCATTGTGACTCAAAT
AATGTGAGACATATGCTAGCTAAACAACTCTCCATCGGTATTGGAGCAGCAATTATTTTT
GTGATCCTGGTAGCAGTTTGTCTTTGGCTATGCAAATGGCTCCGGAAGAGGGAAGAAAAC
AAAGCTAAGCAAAAGTATTTCAAGAGGAATGGTGGATTGCTTTTGCGACAACGTATTTCC
TTAAATGGAGAAAGTAGTGGTGGCTCTTTGCCAAAGCTCTTTTTGAAGGAGGAGTTGGAG
AAAGCAACAGACAATTTCAATGAAATTCGAATTCTTGGTAAAGGAGGGGCTGGGACTGTT
TACAAAGGAATGTTATCAGATGGAAGCATTGTAGCTGTGAAGAAGTCCAATGCAGTGGAT
AAAGATCAAATTGGACAGTTTATAAATGAGATACTCATACTCTCCCAAATAAATCACAGA
CACATTGTCAAGGTACTTGGTTGTTGCTTAGAAACTCAAGTCCCATTATTAGTTTATGAG
TACATCTCGAATGGAACCTTGTCATCCCATATTCATGGAAACCTCAGTCACAGTTCTAAC
CCTACTGTCTCAAAGTCTGAGTTGGATGATCAGATTCTTCCGCACCCAGTAATAATATTA
TCGTGGGATCATCGGGTGCGAATTGCTGCAGAAATAGCAGGGGCACTATCTTACATGCAC
TCATGTGCTTCTACTCCCATTCTTCACAGAGATATAAAATCAAACAACATATTACTAGAC
GATAATTTTAGAGCAGTGGTTTCTGATTTTGGACTATCGAGATTATTGTCTGTTGACAAG
ACTCATTTAACAACAATGGTAGGGGGTACATTTGGTTACATAGATCCAGAATACTTCCGC
TCAGGTCAACTTACAGACAAATGTGATGTCTATGCCTTCGGTGTAATTCTTGCAGAGCTT
CTAACAAGTCAAAGAGTTGTCACTTCAAACCAACCAGAAGATCCAGGTTTGGTTATCCGT
TTCACATTAGCATTGAAAGAAAACTGTATAATTGAGATTGTAGACCCTGAAATTGTAAAA
GAAGTTGAGGATGAACATGTGATTCCTGCTGTGGCCAAACTTGCCAAGAGATGCTTAAAT
TTTAATGCAAGGAGAAGGCCATCCATGAAGGAGGTGGCAGCCGAACTTGAACAACAAGGA
AAAATGAGGCAAGATATGCCTCATAATGAGAGTTTTCAAGATAACATTTCACCAAAAAGT
GAAAGTTCATGTAGTCATACTTCTGATTGTACCGAAGAAGATCATCAGAACTCAGTGTCT
CACAATGAAATGCATTATGACAGAAAGGGAAGTTTGTAACTTTTATAACTTCAACTTTTA
TCTTTTGTAATTGTAATGTCGAAGTAATTGCATGTATGGACACATAATCAAATGAAGATT
AGCATGATTTGCATTAATATTTAAGTCGTATATATGATTTGTT
