Microarray Probes on PGSC0003DMT400028324
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51561_PI426222305 |
JHI_St_60k_v1 |
CAAGGGATAGAGATCTTTAATTAGTTCTTGTTTGTTTGGGGACATTTCCATTTACTCGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400028324
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400028324 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G13870.1 |
+1 |
3e-154 |
438 |
199/266 (75%) |
xyloglucan endotransglucosylase/hydrolase 5 | chr5:4475089-4476217 REVERSE LENGTH=293 |
Transcript Sequence (977 bp)
>PGSC0003DMT400028324 977 pgsc_dm_v3.4
CAATATCTCATTCAACAAAACAAAGGAAGATAGTTAGTAATGGCTATGAAGGGGGTTTTA
GTTGCTTTTGTTATGATTAATTTGTCAATATTGGCAAATTGTGGGGCACCAAGGAAGGCA
ATTGATGTACCTTTTTGGAACAACTATGAACCAAGTTGGTCTAGTCACCATATTAAGTAC
CTTAATGGTGGTACCACTGCTGAACTTCTTCTTGACAAATCTTCAGGAACTGGATTTCAA
TCAAAAAGATCATATCTATTTGGTCATTTCAGCATGAAAATGAAGCTTGTTGGAGGAGAT
TCTGCTGGTGTTGTCACTGCATTTTATTTATCGTCAACCAATGCTGAACACGATGAGATA
GATTTCGAATTCCTCGGTAACAGAACCGGTCAGCCATACATATTGCAGACCAATGTGTTC
ACAGGAGGCAAAGGAGATAGAGAACAGAGGATCTATCTTTGGTTTGATCCAACCAAGGAC
TTTCATTCCTATTCTGTTCTTTGGAACACTTTCCAAATTGTGATCTTTGTGGACGACGTC
CCAATAAGAGTATTCAAGAATTCAAAAGACATAGGAGTGAAATTTCCGTTCAATCAGCCG
ATGAAGATCTACTCAAGCCTATGGAACGCGGATGATTGGGCTACGAGAGGAGGGTTAGAG
AAAACCGATTGGTCCGGGGCGCCATTCACCGCTTCCTATACTTCATTCCACATCGATGGC
TGTGAGGCTGTCACCCCACAAGAAGTGCAAGTTTGTAACACTAATGGCATGAAATGGTGG
GATCAAAAGGCTTTTCAAGATTTAGATGGTCCTCAATATAGAAAACTTCAATGGGTTAGA
CAAAAATTCACAATATATAACTATTGTACTGATAGAAAAAGGTACCCTACACTTCCTCTA
GAGTGTACAAGGGATAGAGATCTTTAATTAGTTCTTGTTTGTTTGGGGACATTTCCATTT
ACTCGTTATATAAAAAC
