Microarray Probes on PGSC0003DMT400028172
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39543_PI426222305 |
JHI_St_60k_v1 |
CTTAGTGGAAAAAGATATAATTAAAGACGATTTGGGTGGGCTTCTAACTTTTGACTCTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400028172
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400028172 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G47670.1 |
+3 |
7e-156 |
460 |
216/437 (49%) |
Transmembrane amino acid transporter family protein | chr1:17536834-17539486 REVERSE LENGTH=519 |
Transcript Sequence (1701 bp)
>PGSC0003DMT400028172 1701 pgsc_dm_v3.4
CTCACATATATTCACAATTGAAACAAAAAACCTATTTCTCATATTTACAAAGTGCAATGG
GAGATGTCGAGGTATCCGAACGGCGTCGTATAGAGGGATCTTTCTCTTCATTCAAAATTA
TACCCATTAATGACGATGACGACACTCTTCACTCAGAAGGAACAGATTTTTCACCGGTTG
ACGATGACGTCGTCGTCGATGAGAAGAAGGATACGGATGTTGTGAAAGAAATAGACAGTT
TGTTGCCAATAACGGAATCGATAAAGGGGAATGCTTATACGGCAGCGTTTCATCTCTTGT
CGTCCGGTATTGGAACTCCGGCGCTTGTTCTTCCCTTTGCTTTAACCTCACTCGGATGGT
CATGGGGAATAGTAGTTCTCACTGTGATTTTTGCATGGCGGCTCTACACCATGTGGCTCT
TAGTTCATCTTCATGAAACGGTCAATGGAACTCGTTACAGCAGATATCTTCAACTCGCCA
TCATAGCTTTCGGAGAAAAATTGGGAAAGTGCCTTTCCATCTTCCCAACAATGTACCTAT
CAGGGGGCACTTGTGTCATGTCTATTATAGCAGGGGGACGTACCCTACAACTTTTCTACA
ATGCCATGTGTGAAAATGATCACCATTGTCTTCACAAATCACTAAGTGGAGCTCAATGGT
TCTTAGTGTTTGTGTGTCTTGCCATTTTAATTGCCCAATTTTTTCCAAATTTGAACTCAT
TGGCTTGGGTCTCCTTTGTTGGTTCAATCTTGGGTGTGACCTATTTCACTATGATTTGGG
CACTTTCCATTGCCAAAGGCAGGCCTAATGGTGTCACTTATAATCCGTCGGATAATGTAA
CAACAACTATGGCTCAATTTCGCGCTGTCCTAAATGGTGTTGCTATCGTTGCCATTGCTT
TTCGAGGTCACAATCTTGTATTGGAAATACAGGGGACATTACCAACAAATCCAAAACATC
CTACAAAGACAAGAATGTGGAGAGGAGTGATAGCATCCTACTCTTTAATCGCAATGTGTG
TATTTCCCTTGGCAATTGGAGGATATTGGGCTTATGGAAATATGATGCCGGCAAATGGAA
TTATGGGTGCAATTGCTAAGTACCACCAAGAAAGTACACCAAAATGGTTAATAGGCACAA
TATACATGATGGTGGTGATTCAATGTTTATGCTCATTTCAAATTTATGCCATGCCCGTCT
TTGACAACTTGGAAAGAATATACGTAAGCAGGCACCTTAAGGCGTGCCCAAGGTGGGTTC
GATCATGCATCAAGCTCTTCTTTGGCGGATTGACATATTTTATATCCGTGGCATTCCCAT
TCTTGGGAAGCCTAGCCGCGTTTGTGGGAGGGATCGCGTTGCCATTGTCTCTGGTTTACC
CTTGCTTCATGTGGATTTCCATCAAGAAACCTCAAAGAAACAGTTTAATGTATTGGCTCA
ACATGTTTCTTGGGTGTTTGGGCATATTGATCAGTGTTGTGCAAGTTGCTGGCGCGTTGT
GGAATTTGGTGATTGATAAATTGGATGCTAACTTTTTTAATCCTTAGTGGAAAAAGATAT
AATTAAAGACGATTTGGGTGGGCTTCTAACTTTTGACTCTCTAATTTATTACTTTTTACT
TATTTTTCTAAATAGGCTGTTAACTTAATTACCCTATAACATTTGGGAAACTCTTGTATA
ATAGTGCAATTTAACTTGCTA
