Microarray Probes on PGSC0003DMT400028157
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10030_PI426222305 |
JHI_St_60k_v1 |
GGCAAAGGAATACCTAATAGTGTGTCAATATAGTACTTTCATTTAAATCTCCACATCGTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400028157
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400028157 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G55020.1 |
+3 |
0.0 |
934 |
441/620 (71%) |
lipoxygenase 1 | chr1:20525798-20530143 FORWARD LENGTH=859 |
Transcript Sequence (2042 bp)
>PGSC0003DMT400028157 2042 pgsc_dm_v3.4
TCAGCTGACATATATCGTGTTTTAAATTTTAAACAGATCCTAAAAGTGAAAGTAGGATTC
CACTACTTATGAGTTTAGACATCTATGTACCAAGAGACGAGCGTTTTGGACACATTAAGT
TGTCGGACTTCCTGACGTATGCTTTGAAATCCATTGTTCAGTTCCTTATCCCCGAGTTTC
AAGCTCTCTTTGATAGCACACCTGATGAGTTTGACAGCTTTGAGGATGTACTGAAACTTT
ATGAAGGAGGAATCAAATTGCCCCAAGGCCCTTTTCTTAAAGCCCTCACTGATAGTATTC
CTCTAGAGATTCTAAAAGAAATTATCCGAACCGATGGTGAAGGAAAATTCAAATTCCCAG
CACCTCAAGTTATTCAAGAGGATAAAAGTTCATGGAGGACTGATGAAGAATTTGCAAGAG
AAATGCTTGCCGGAGTAAATCCTGTCATAATCAGCAGACTCCAAGAATTCCCTCCAAAAA
GCCAGTTAGATTCTGAAGTATATGGCAATCAAAACAGTACAATAACCAAAGAGCATATAG
AGAATACACTTGATGGGCTAACGATCGATGATGCAATCAAGACTAACAGGCTTTATATAC
TAAACCACCATGACATCCTTATGCCATATGTGAGGAGAATAAACACGACAAACACAAAAC
TCTACGCCTCAAGAACTTTGCTATTCTTGCAAGACGATGGAACAATGAAGCCGGTAGCAA
TTGAACTAAGCTTGCCACATCCAGATGGCGATGAACTTGGTGCTGTTAGCAAAGTCTATA
CCCCAGCTGATCAAGGTGTTGAAGGTTCAATATGGCAATTGGCTAAAGCTTATGTTGCAG
TGAATGACTCGGGTGTCCATCAGCTAATTAGTCACTGGTTGAATACACACGCAGCCATTG
AGCCTTTTGTGATTGCTACAAACAGGCAACTAAGTGTGCTTCACCCAATTCATAAGCTTT
TACATCCTCATTTTCGTGACACGATGAACATAAATGCTTTGGCAAGACAGATCTTAATCA
ATGCTGGTGGAGTTCTTGAGATGACAGTTTTTCCTGCCAAATATGCGATGGAAATGTCAG
CTGTAGTTTACAAAAGTTGGGTTTTTCCTGAACAAGCACTTCCAGCTGATCTTATAAAGA
GGGGAGTGGCCGTAGAGGACTCTAGTTCCCCACATGGTGTTCGCTTGCTAATTCAAGACT
ATCCATATGCTGTTGATGGCTTAGAAATATGGTCAGCAATCAAAAGTTGGGTAACCGAAT
ATTGCAACTTCTATTATAAATCAGATGAATTAGTTTTGAAAGATAATGAACTCCAAGCGT
GGTGGAAGGAACTTCGAGAAGAAGGACATGGTGACAAGAAAGATGAACCTTGGTGGCCTA
AAATGCAAACTCGCCAAGAGCTAAAAGATTCTTGCACTATTATTATTTGGATAGCATCAG
CACTTCATGCAGCAGTCAATTTTGGGCAATACCCTTATGCAGGTTACCTCCCAAATCGCC
CAACGTTAAGTCGAAGATTCATGCCTGAGCCAGGAACTCCTGAGTATGAAGAACTCAAGA
CAAATCCTGACAAGGCATACTTGAAAACAATCACTCCTCAACTGCAGACATTACTAGGAA
TTTCTCTCATAGAGATATTATCAAGGCATGCATCAGATGAGATTTACCTTGGACAACGGG
ACTCATCCGAATGGACAAAGGATCAAGAACCCATTGCTGCTTTTGAGAGATTTGGGAAGA
AGTTAAGTGAGATCGAGGATCAAATTATACAGATGAATGGTGATAAGAAATGGAAAAATA
GGTCAGGGCCTGTTAACGTTCCATATACATTGCTCTTCCCTACAAGTGAACAAGGACTCA
CAGGCAAAGGAATACCTAATAGTGTGTCAATATAGTACTTTCATTTAAATCTCCACATCG
TCAAGTTTCATTTTTTTCTTTTATTCAATTACAACCTCAAGTTTGTGTGATGTAACTTTT
TCTTGATATATTTCAATATATATAGATGTATTATATGTAATGGTAGAACATTTGAATAAG
AC
