Microarray Probes on PGSC0003DMT400027895
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_6910_PI426222305 |
JHI_St_60k_v1 |
TAAGTTGCCACTTGCCGTCCCTGACACCAATGTAATGCTTTACGATTACATGATATAGCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027895
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027895 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G47160.2 |
+1 |
4e-67 |
210 |
105/213 (49%) |
RING/U-box superfamily protein | chr3:17360238-17361879 REVERSE LENGTH=257 |
Transcript Sequence (672 bp)
>PGSC0003DMT400027895 672 pgsc_dm_v3.4
GCATTGGCTCTTCCCCGGGATCTCGATGGGGATTGTGTTCAGATGAAAGTTTCCTATGGT
TTTCTCGCCCCCTTCTTGCTATTTCTGATAGAATGGATGGACTATAGTTGTTTAGATACT
CTAGCTAGTTGCTTAGGACTCCTTCACATTCTTGTTTATAAGGTTTATGTTGATGGAATG
CCAACAATGCCCCCACAAGAAAGGAAGGCCACAATTAGAGAATTCTACGCCATTATATAT
CCTTCACTAAAGCAGCTGGAGGGGAATTTAGTGGAATTAATGAAGGAGAATACTAAAGTA
ACTCAACTCTTGAACACTTCAAATGGAAGAGTGGAAGAGAAAAGACAGTCATGTAAAAGT
ATTCCGGGAGAAGAAGAAGAATGTGGTATATGCATGGAGAGTGGCTCCAAGATAGTTTTG
CCTAATTGTAGCCATTCCATGTGTGTTGGCTGTTTCCACGACTGGTACATCCGGTCTCAA
TCATGCCCTTTTTGTCGAGGTAGTCTAACGAGAGTAAACTCCAGAGACTTGTGGGTTCTA
ACTAGTGACTGTGATGTGGTTGATAGCACCACTCTAGAGCAGGAGAATGTAAGGCGGTTC
TACCTTTATATTGATAAGTTGCCACTTGCCGTCCCTGACACCAATGTAATGCTTTACGAT
TACATGATATAG
