Microarray Probes on PGSC0003DMT400027660
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8536_PI426222305 |
JHI_St_60k_v1 |
GAAACCGTAATATCGCTATAGTAATGAATAGGTAGTAGCTGAAAGTTGCAATCATTCAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027660
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027660 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G18670.1 |
+3 |
0.0 |
572 |
274/437 (63%) |
beta-amylase 3 | chr5:6226138-6227999 FORWARD LENGTH=536 |
Transcript Sequence (1605 bp)
>PGSC0003DMT400027660 1605 pgsc_dm_v3.4
TAAAACATTGTTCTATTGCTATGTTGACATGTCTTGCTCTATTGGAAATTTTCTTGCAGA
CTGATGGTGTGAAACTATTTGTTGGGTTACCACTTGATACTGTTTCAAGTACTAATACAA
TAAACCATGCTAGAGCAATTGCAGTTGGATTAAAAGCATTGAAGTTACTAGGTGTTGATG
GCATAGAACTACCAGTCTGGTGGGGAGTTGTTGAGAAGGAAACCAGGGGAAAGTATGACT
GGACAGGCTACCTTGCACTTACTGAAATAATCCAAAAGTTGGGACTTAAGCTTCATGTGT
CACTTTGCTTCCATGCATCAGGGGAAGCCAAAATTCAACTCCCAGAATGGGTTTCTCAGA
TTGGTGAATCTGATCCTAGTATCTTCTTCAAGGACCAATCAGGACAACACTATAAAGATT
CTCTTTCGTTTGCTGTTACTGATGTTCCTGTCCTTGATGGAAAGACTCCGGTTCAAGTCT
ACAAAGAGTTCTGTGAGAGCTTCAAGACTGCATTTTCACCGTTCATGGGCTCCACAATCA
CGGGCGTTTCTGTTGGTCTAGGACCAGAAGGCGAGCTTCGCTATCCTTCTCATCACAATC
CATCCAAAATGAACAATTATCAAGGAGCTGGTGAGTTCCAGTGTTATGATAAATACATGC
TGAGTTCTCTCAAACAGTATGCCGAAAGCAACGGGAATCCTCTGTGGGGATTGGGTGGTC
CGCACGATGCCCCTGGTTATGATCAACCACCCATGACAAGCACCTTCTTCAAGGAGAATG
AAGGATCTTGGGAGACGACTTATGGTAACTTTTTCCTTTCTTGGTACTCGGAGCAGCTCA
TTTCACATGGAAGCCGACTTCTTTCGCTTGCCTCTGAAACATTCCATGATGTTCCAATCT
CCATTTGTGGCAAAGTTCCCCTTGTGCATTCTTGGTATAAAACCCGATCCCATCCTAGCG
AGCTAACAGCCGGTTTCTATAACACAGCCAACAGAGATGGTTATGTAGAAGTCGTTGAGA
TGTTTGCAAAGCATTCGTGCCAAATTATCTTGCCTGGGATGGATCTCTCGGACAATCTCC
AGCCAAACAAATCTCTCTCAAGCCCAGAGTTGTTGGTTGCTCAAATTACATCATCTTGTA
GAAAGCAGGGAGTGGAAATCTTGGGGCAAAACTCAATGGTTGCAAATACACCAAATGGTT
TCGAACAGATAAAGAAGAAGTTGTCAAGTGAAAAGGAAATGAGCTTGTTCACATATCAAA
GAATGGGTGCGGACTTCTTTTCTCCTGAACATTTCCCTGCATTCACTCAATTCGTTCGGA
ACCTTAATCAACCAGAACTGGATTCGGATGATCAACCAACAAAACAAGAAGAACGTGTTG
CCAGTAATCATCTCCAGATGCAAGCAGCTTAGATTCAGATTCTATGTACATATTGGTAAT
CATCTTAGAAACCGTAATATCGCTATAGTAATGAATAGGTAGTAGCTGAAAGTTGCAATC
ATTCAGTTTTTCTGTTATATATATATATGTATTGTTATAGTATGAGAAAGTTTGTTGGCT
TGAATTATGAAGATAGCTTTCAAATATATTTCTTCTTTGGTTGCA
