Microarray Probes on PGSC0003DMT400027157
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2476_PI426222305 |
JHI_St_60k_v1 |
AGGGAGAGTGATGTTGTAGTAAAGGGTTCAAAATTCAAGAGGATTTGTGTGTTTTGTGGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027157
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027157 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G53450.1 |
+2 |
6e-126 |
367 |
185/212 (87%) |
Putative lysine decarboxylase family protein | chr3:19812977-19815430 REVERSE LENGTH=215 |
Transcript Sequence (1276 bp)
>PGSC0003DMT400027157 1276 pgsc_dm_v3.4
GTAGGGTTGAGTATAAAACAAATGTAATTATGTTTTGGTGACGTGGACTGTAGCTCGTAC
ATAGAACCATTTGGGAGTGGCCAATGGTGTGGTCAAGCTAAAAAGGTAGACGCAATTTTC
TTCTATATATGGTACGTATAACTCTACATATGTGTAAGGCCCTATATATATTGCTCTCTT
TCAGAATAATAACATACCAAGTTTCTTATTTTATCATCTAATTTGCAGAAAAAGTTGGGA
AGAAAAAATGGAGAGGGAGAGTGATGTTGTAGTAAAGGGTTCAAAATTCAAGAGGATTTG
TGTGTTTTGTGGAAGTAGTCAAGGCAAGAAGAGTAGCTATCAAGATGCTGCTATTGAGCT
TGGCAAAGAATTGGTGTCAAGGAATATTGATTTGGTCTATGGAGGAGGTAGCATAGGCCT
TATGGGTTTGGTTTCACAAGCTGTTCATGATGGTGGGCGCCATGTTATTGGGGTCATTCC
CAAGACACTCATGCCTCGAGAGTTAACTGGTGAAACAGTAGGAGAAGTGAAGGCTGTTGC
AGGTATGCATCAAAGAAAAGCAGAGATGGCTAGGCATTCTGATGCTTTTATTGCCTTGCC
AGGTGGTTATGGAACTCTTGAGGAGCTGCTTGAAGTGATAACCTGGGCGCAACTAGGCAT
CCATGATAAGCCGGTAGGATTGCTGAATGTGGATGGATACTACAATTCATTATTGTCATT
TATCGACAAAGCTGTTGAGGAAGGTTTCATCAGCCCAAATGCACGCCACATCATTATATC
AGCACCATCGCCAAAGGAGCTAGTGAAGAAACTGGAGGAATATGTTCCTTGCCATGAAGG
AGTTGCTTCTAAGTTGATCTGGGAGACGGAACAACTTGGTTACCCTCAAGCACATGAAAT
TTCAAGATGAAGGCTGGATTTGCAGCATACTATTACGCGTTAGGACATGATAATATCGTA
TTACTGGAACAAGCTAACCTGAAATTCTTAATTTTTGTCATGGGGAATTAAGGGTGCTCT
TTTTTTTGTTTTTCACCCTGTAAATTACTCCAAACATATCTCAACTCCCCTCCTTGTTCC
CTTCAAGTAGAAATTTCCTTATTTACTGTAAGATGTAACTATTTAAGTTATGCATATGGT
CTTCTTCTCTAATGTTTACAAAGTCTGCAGTGTAGTTCTGTATTTCTTGTCCTTTTGTAT
TACCTCCTTTGTTTCAATTTGTTAGTCTGGTTTTGACTTGACAGGGTGTTTAAGAAAATA
AAAAAGACCTTTGAAT
