Microarray Probes on PGSC0003DMT400026678
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23147_PI426222305 |
JHI_St_60k_v1 |
AGTTCATCGCCATGATAATAAACGTCCTAAGTTTTAGATTGCTTCCAAATGCTTGAAATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400026678
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400026678 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G23230.1 |
+2 |
4e-24 |
95 |
54/71 (76%) |
Integrase-type DNA-binding superfamily protein | chr3:8289647-8290066 REVERSE LENGTH=139 |
Transcript Sequence (673 bp)
>PGSC0003DMT400026678 673 pgsc_dm_v3.4
CACATTAGCACGTTATATTATATCCCCTAGATATTAACAAAAACATAGAAGGGTGACCAA
GGTGATGGAGAATGAAGATCAAAGAGGAAGAAGAGAGAACAAATATCGAGGCATTCGACG
AAGACCATGGGGAAAATATGCAGCGGAGATACGTGATCCTAATAGGAATGGTGCACGTCT
ATGGTTAGGTACGTTTGAAACAGCTGAAGAAGCGGCTAGAGCTTATGATAGAGCTGCCTT
TTCTTTAAGGGGCCATCAAGCCATTCTCAACTTCCCTAATGATGGACATTATCATATCAA
TAATAATACTAATGTACCTCTAGGTCCTGGACCAAACTATAACGTGCCATCTACAATGGT
GAACAATATGAACATGTCCTCTTCTTCTGCTTCTGCTTCGGCTTCGGCTTCGGCTTCTTC
TGATCATCGACATGATCATGGAGAGAAGGTTGAATTTGAGTATTTGGATAACAATCTTCT
AGACGAGCTTCTTGCTTCACAAGTTCATCGCCATGATAATAAACGTCCTAAGTTTTAGAT
TGCTTCCAAATGCTTGAAATGTTCTTATTTACTATTTTATTGTCTTGCTATTTCCAATTT
ATTTAATTTTTTCCACTAAAGTTTATGTCCAACTTGCTTTAGTTTGCTAGTATATCTCAT
GTTATTATTTTCG
