Microarray Probes on PGSC0003DMT400026627
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23224_PI426222305 |
JHI_St_60k_v1 |
CAACGTGAAAGTTCAGATTCCCCTTTTCAACTGCTTTTTGTGAATTCATTGATGACTTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400026627
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400026627 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G23240.1 |
+1 |
2e-38 |
137 |
93/178 (52%) |
ethylene response factor 1 | chr3:8295705-8296361 FORWARD LENGTH=218 |
Transcript Sequence (911 bp)
>PGSC0003DMT400026627 911 pgsc_dm_v3.4
CAACAATAACAAAAAATCTATTCAAATTTTGAACAAATGGATTATTCATCATGGGATAAT
CTTCTTTTTCAGTATAATTCACTTCCATTTAACGTTAACGATACAGAAGACATGTTCCTT
TTTAATCTTGTTGCTGAAGGATCATCGCAAGAAACAGTGAACTCGCCGTCTGGTACTTAT
GGAATAAAGGAAGAGGAAGTGACCTCATATGAAGAAGAAACAGAACGTGAAAAGGAAAAG
AATTACAGAGGTGTTAGAAAGAGGCCATGGGGGAAATTTGCTGCTGAAATTCGTGATTCT
ACGAGGAATGGTGTTCGTGTATGGCTAGGTACATTTGATAATGCTGAAGAAGCTGCGTTA
GCGTATGATCAAGCTGCATTTGCTATGAGAGGTTCGATGGCTATACTTAACTTTCCTGTG
GAGATAGTTAAGGAGTCGTTAAGTGAAATGAAGTGTAGATTTGATGAGAATTGTTCGCCG
GTGATTGAATTGAAGAAGAGATATTCAATGAGGAGAAAGAGTGTGAGTAGAAGAAACAGA
GCAAGAAAAGATGTTGTCGTTTTTGAAGATTTGGGTGCTGAGTATTTAGAGGAATTGTTG
ATTTCTTCAGAAAGTATCACAAATTGGTGATTTCTTTCCCCTGTTTCTCAGCCTGCTCTG
TTTATATAATATTGAATTAGGATTTCATTTGTTTGATTGTTTTTTTAAGAGAGGGAAAAT
GGGGAACGTCTCTCACCAACAACGTGAAAGTTCAGATTCCCCTTTTCAACTGCTTTTTGT
GAATTCATTGATGACTTTATTAATTTATGGTTCTTTTGTACAGACAAAAGAACTAATTAT
GTTTTTTTATAAAATCTAAATGTAGAGACATGATGAAGATTGTCCATTTTACCAGAAATG
TTGAATCTGTG
