Microarray Probes on PGSC0003DMT400025977
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_972_PI426222305 |
JHI_St_60k_v1 |
AATATAACATGCCTAAGTGGTTTCGGTGAGTAATTTTCAGCTCAAAGTTGTCGTTGTATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400025977
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400025977 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) |
Solyc02g090350.2 |
+3 |
2e-123 |
366 |
174/193 (90%) |
genomic_reference:SL2.50ch02 gene_region:46490373-46492437 transcript_region:SL2.50ch02:46490373..46492437- go_terms:GO:0019825 functional_description:Cytochrome P450 |
| TAIR PP10 |
AT2G45570.1 |
+3 |
4e-76 |
244 |
111/193 (58%) |
cytochrome P450, family 76, subfamily C, polypeptide 2 | chr2:18779935-18781922 REVERSE LENGTH=512 |
Transcript Sequence (889 bp)
>PGSC0003DMT400025977 889 pgsc_dm_v3.4
ATTTAATCCAGTTGAACATACATCAAATATAACATGCCTAAGTGGTTTCGGTGAGTAATT
TTCAGCTCAAAGTTGTCGTTGTATCTCAGGACCTATTTAATGCCGGAACTGATACAAGTT
CGAATGTAGTGGAATGGGCTATGACTGAGCTTCTTAGATCTCCAGAGATTATGAAGAAAG
TCCAAGCCGAGCTGGTACAAGTCCTCGGAGAAGGTAACCCGATGGAGGAAGCTGACATTG
CCCGACTCCCTTACTTGCAGTGCATTATTAAAGAAACTTACAGGATGCACCCTCCAGCTC
CTCTTTTGGTTCCTCGAAAAGTTGAGGAAGATGTTGAGGTGTGTGGCTACACTGTCCCTA
AAGGTTCAAAAGTGTTGATAAATGTGTGGGCAATTGGCCGGGACTCGACTCTATGGGAAG
ACCCTTTGGTGTTTAATCCTGATAGATTTAAGGATTCAAAATTGGATGTGCGAGGTCAAA
ATTTTGAGTTAATTCCATTTGGTGCTGGTCGAAGAATTTGTCCTGGTCTGCCATTGGCAA
TAAGGATGATCCCAGTAATGCTTGGCACACTGTTAAATACATTTAATTGGAAAATTGAAG
GTGACATTGCACCAAAAGACATGGACATGCAGGAGAAATTTGGCCTCACCTTGGCCAAAC
TTCGTCCTCTCCGAGCTGTCCCACTTCCCCTTTAAAATCCAAAATTAGTTGGATTCCTAT
CAAAGGCAATGGACTATGAACATTGTAACTAATATTTCAAGTCCAAAAAATTAAAAAATA
AATAATAATTTAATATAAGTACAAATTTATGTAATTTTGTATTGAAAAATATTAAAGTTT
CGTCAGTAAATGCAAGGGAATTTGAAGACTTTAAGTTCGTTCATGCGCG
