Microarray Probes on PGSC0003DMT400025820
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_7602_PI426222305 |
JHI_St_60k_v1 |
GTATCAATGGCATATGCTAAACCATCTTGTTCATGGATTGGATTAGGAAAGAAGACAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400025820
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400025820 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G76240.1 |
+2 |
1e-78 |
248 |
152/311 (49%) |
Arabidopsis protein of unknown function (DUF241) | chr1:28602949-28603875 REVERSE LENGTH=308 |
Transcript Sequence (1149 bp)
>PGSC0003DMT400025820 1149 pgsc_dm_v3.4
ATTTAGATCTACTTGTTGTCTCCTTTATAAACACTTCTCAACTGTCCAACTCTTCACAAA
AATTATTTTTTTCCCCTTTTCTGTCCAAAAAATGGGAAAAGAAAAAACACTATCAAAATC
AAGAACAATGGCTCCTCGAATGGTGGCTAATTTCCGCAGATCTCTTTCTTTCCCAAATCA
CCCAAACCATTCAAATAAACCCAAAAAATCCTTCCATGTCCGATCTGCTAGTCTACCATG
TCGATCTCATCCATTAATTTCTCAGCTCAAAGATGATTTAAACGAGCTCAAATCATGGGC
TATTAAGCCTGAAAATCGAACTTCAAATTGGATTTGTGATGGACTCAATCAACTGAAAAT
TGTTCATGAATCTCTTGATGATCTGCTTCTTCTTCCACAAACACGCGAATCCTTACATGG
ACATTCTGATTTGGTCGAGAAGCTTCTAGATGATTTCCTTCACTTCGTCGACGTTTATGG
AATCTTCCAGACCTTGATACTCACTTTCAAGGAAGAACATTTAGCTGCTCAGGTAGCTGT
GAGGCGTAAAGATGAATCTAAGATTGCTTCATACGCGAAAGCATTGAGAAAAATGGCTAA
GGAAATGGATAAACTCGCGTTCAACGTACAATGTATAGGGAAATATATTGTACCTCAACA
AACTATACCAATACCTGATGGAGATGCAGAGTTAGCAGAAGTGATGAAAGACATAATAGA
AGTAACACAATTAGTTTCAATTGCACTTTTTAATGGACTTGGAGTATCAATGGCATATGC
TAAACCATCTTGTTCATGGATTGGATTAGGAAAGAAGACAAAAAAATTGAAAGAAAATGA
AGGAATTGTGGAATTTGTAGAAATGGAATTGGAGAATTTGTTGAGAAAAAATAAAGGAGA
TGAAGAGGTGAAAATTGTGACTAAAAAAATGCATGAATTGGAAGATTGTATTTGTGGGAT
TGAAAAATGTGGAGAGAAAGTGTTTAGGAGTTTAATTAATGCTAGAGTTTCATTGCTTAA
TGTATTCACACAATAGAAAAATAAGGTAAAAGGGAAATTAAAGATGATGCATACATGTAT
ATTTTGCTTAAATGTTTTTTTTAACTATGTATTTGATTTGTTATTGTTATAAAGTTGATT
TGATTGACG
