Microarray Probes on PGSC0003DMT400025122
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30506_PI426222305 |
JHI_St_60k_v1 |
GAAATTAAGGCCTCAGATGATCAGGTTGATGATTTTTAGTATGCCTTTCATTCAAGAAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400025122
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400025122 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G18220.1 |
+2 |
4e-90 |
281 |
142/311 (46%) |
Drug/metabolite transporter superfamily protein | chr4:10078768-10080109 FORWARD LENGTH=344 |
Transcript Sequence (1409 bp)
>PGSC0003DMT400025122 1409 pgsc_dm_v3.4
TTCCAATTGTCAGAATGGTCACGGTCACGATACACCCAGTGGTGCAAATAAAAGCAATAG
AATAATTTAGGGGAGCAAAATGCTGATGGACTTATAAATTATACTTTGTGCTTCTATAAG
TTATCACAACGGTTATCCAAATTTTATGGCGCGTGTTAGCATGGAAGGAGCACATGAAAA
GCTGCTGCATCTCACTTTTGAAGAAGCAGAGTCATCTGAAAATGCAGATAACAGCAGTGT
TCAATCAAGTAAATTTATACTATGGCTTCAAATATTTATCTTCACATTTTTTACTATTGG
TGGTCAAGCAGCTGGCACTCTGTTGGGCAGAGTATACTATGAACAAGGTGGCCAAACCAG
ATGGATTGCTACATTGGCACAAACTGCTGGATTCTCAATTCTCCTGCCTTTCATTTGCTA
TCCTTCACCCAAAAACCACAATGAAGATGAACTAACCATTCACCAGCCTTCTATATTTGT
TCGCGCTTCGGTTTACATCTTCCTTGGTTTATTTCAAGTAGCAAACTCTATGTCATTTAC
AGTTGGAGTACAGTACCTTCCTGCCTCAACTTATTCTCTAATTTCCGGTTCTCAATTGGC
CTTCAACGCGATCACCTCCTTCCTCCTCAACGGACAAAAAATCACTGCAATTATACTCAA
CTCCATCGTGCTACTCTCCTTTTCATCCTCTGCTGTTATTTTCCAGAATGAGACAGGTGA
TAGCGGAGAAATATCTCAGAAATCTCTGCTAATCGGATTTGCAGCTACCACTTTCGGGTC
TCTAGGTTACGCTTTACAGTTCTCATTTACAGAACTCGCATTCCAAAAGGTATTCAAAAG
TAGCACATTAAAAGAAGTCATGAAAATGTCGTTTTTCATAGGTTTTTTCGTGACGATTGC
TTCGTTAACGGGGCTTTTCGCGAGCGGTAATTGGAGGCATTTGGAGAAGGAAATGAGAGA
GTACAGAACAGGGAAATCATCATATGTTACAAACTTAGTTTGTTCTGCTATTGCTTGGCA
GTTATATGCTCTTGGATCATGTGGATTGGTTTTTAAGGCATCTTCTTTGTTCTCTAATGT
AGTCATCAATTTGGGAACTTCAATTGTGCCAATTTTTGCAATGGTGTTCTTGAAAGATAG
AATGACTGGATTGAAAGTGTTTTCATTGTTATTGGGATTATGGGGATACACATCATATAT
ATATCAACATTATCTTGATGATTTAGAGGCAAAAACAAGTGAAATTAAGGCCTCAGATGA
TCAGGTTGATGATTTTTAGTATGCCTTTCATTCAAGAAACTTAAATATCTGAACAATTAG
CTTTGTAATTATGATTGATAAGTTCAATATGTAAAGTTATAGCTTATTGTTTAATCATGT
AAATTTCAAGATTTCCGTGTAAATTGAAC
