Microarray Probes on PGSC0003DMT400024968
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_32645_PI426222305 |
JHI_St_60k_v1 |
CAATGATAATTCACTATGTTGTTTGTTTGCACATCTAGTGTCTACTCAGAGTTTCAAACC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024968
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024968 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G46240.1 |
+3 |
0.0 |
726 |
388/675 (57%) |
potassium channel in Arabidopsis thaliana 1 | chr5:18743652-18746561 REVERSE LENGTH=677 |
Transcript Sequence (2243 bp)
>PGSC0003DMT400024968 2243 pgsc_dm_v3.4
ATAGCATCCAAGAAACTTCAAAATTTCAAAACCCCACCAACAAAAAAAGAACTTCAATGT
CATTTTCTTATGCTAAATACTCTGGTTTCTTCTCTAGTGATCTCCTTCCTTCTCTTGGAA
CCAAAATCAACCACGAAACAAAGCTTCGAAAATATATCATTTCGCCTTTGGATCTTCGTT
ATAGGGCTTGGGAGATGTTTCTACTATTTCTTGTCATCTACACGGCGTGGATTACGCCTT
TCGAGTTTGCATTTCTGATATGCAAAATAGATGCCTTGGTCATCTTTGACAACATTGTCA
ACTGCTTCTTTGCTATTGACATTTTCCTTAACTTCTTCATGGCTTATCTTGATAAAGAAT
CTTATATTCTTGTTGATGATCCTAAAAAGATAGCAATAAGGTACTTATCAACCTGGTTCA
TATTTGATGTTTGTTCCACTGTACCATTTCATGATTTCCTCTTTATTGATCACAAAGAGA
GCGGCGTTGGATTTAAGTTGCTCAGTATGCTCAGACTTTGGCGTCTTAGAAGAGTCAGTG
CCCTGTTTGCAAGGCTTGAGAAGGACATCCGTTTTAACTATTTCTGGACACGATATGCAA
AACTGATATCTGTAACTTTGTTTGCAGTGCATTGTGCTGGATGTTTTAACTATGTGATTG
CAGATAGATATCCTGATACTAAAAGAACATGGATTGGTGCAGCAAATCCCAATTTCAAAC
AAGATAGCCTGTGGGATAGATATATAACTTCATTATATTGGTCTATTGTAACACTAACAA
CAACTGGTTATGGAGATTTACATGCTGAGAACACAAGGGAAATGCTCTTTGACATCTTTT
ACATGTTGTTCAACTTGGGATTGACATCTTACATCATTAGTAATATGACAAATCTTGTAG
TTCACTGGACCGGCTACACAAGAAACTTCAGGGATAATGTAGAAGCAGCACAAGAATTCG
CGAAACGAAATCAGTTGTCACCAAGGATACAAGATCAGGTTTTGTCTCATATCTGTCTTA
AGTTCAAAACTGAATCACTGCAACAAAAAGAGACCATCAATGTTCTGCCAAAAGCTATCA
GATCAAGCATTGCACATTACCTGTTTTTACCAATAGTTCAAAATGTCAGTCTGTTCCAAG
GCGTTTCAAGGGACCTACTTTTCCAACTGGTTCCTGAAATGGAAGCTGAATACTACCCTC
CCAAGGAAGATGTGATTTTACAGAATGAGTCTCAAACAGATTTTTACATAATAGTCTCAG
GAGCATTGGATCTACTAGTAGATATCGATGGACGTGAACAAATCATTGGGAAGGCTGTTG
CTGGAGAATCATTTGGAGAAATAGGTGTTTTACTTGGAAGGCCACAACCATATGCTGTTA
GAACAACTGAAATTTCTCAAATTTTATGTCTGAGTAGGAAAACATTTCTGAACATTCTTC
GCGACAATCAAGAAGATGAACGGATTATAATGAGAAATCTTATTCAGAAACTGCAAGGAT
TTGGAGGCTTTGATAATGTGGACGAGGAAAGCGATCCAAGTTTAGTCTTCAACAACTTTT
CTCATGTTTCTAAGCAAGATACACCAACCAATCTTAGCGACCTGATTAGTATAAATATCC
AAACTTTAGAAGCTAGAACCAAGAAACAAGTAGAAAATGAAGGTGAAAGTTGTGGACGTA
AACGCCAAACAGTTCTTGATCATTCTGTAGTTCCCAAGGGGTGTATTGAAATGACTCAGA
GTCCACCAGAAAGAAGGTGGAAAGAAGATCAACTCGACACAGAACGTGGAGGAAACAAAA
GCATCCATGAGGTCCCCTGCTGTTCTTATTCAGGTAATAGAAGTCAAACTGGTGCAAAGG
GGGGGAAATCTATCAAAAAGAGAGTTACTATTCACATGAGAAACAACATCAATTCATTGC
AGGAGCAGAATGGGAAGCTAATAATACTACCTGATACACTAGAAGAGCTATTCAGAATGG
CAGGTCAAAGATTTGGGGAGTACAATCTCAAGAAAGTTGTAAATGCAGAAGATGTAGAAA
TAGATGAGACAGATGTCATTAGAGATGGAGATCACTTGTTCTTTCTTTCAACTGATTGCT
CATGTGTAGAAACTAGTACAATGTGACAATGATAATTCACTATGTTGTTTGTTTGCACAT
CTAGTGTCTACTCAGAGTTTCAAACCAAAAAATTATATATTGATCATGGTATCTCCAAGG
GATGAAATCAAATTGGAAAATTT
