Microarray Probes on PGSC0003DMT400024594
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42323_PI426222305 |
JHI_St_60k_v1 |
TGCAATCAATCGTGACATAGTATGGATTCTTCTAAGCTGATTCCGCCTCTTATCTATCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024594
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024594 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G52640.1 |
+3 |
0.0 |
1087 |
636/706 (90%) |
heat shock protein 90.1 | chr5:21352542-21355147 FORWARD LENGTH=705 |
Transcript Sequence (2752 bp)
>PGSC0003DMT400024594 2752 pgsc_dm_v3.4
GTCGAAGACTCCAGAAGCAGAGTCTTCACCTCTTTCTCCAAGGCAACTTCTTAACGCTAA
TAGAAGAGCCTAGAACTCTTCTACACTCGTATATAAGCCACCCATCTCCCTCCCCATCCT
CACGAAAATCACGATCGAAAGTGTTCATACAAAAGCGACTTTCATTCTTCATTGCTCCCT
GTAAGGTACAAATTCACATTTTTGAAGCTTTTACTCTAATGGCGGATGTTCAAATGGCTG
AGGCAGAGACCTTCGCTTTCCAAGCTGAGATCAACCAGTTGTTGAGCTTGATCATTAACA
CTTTCTATAGCAACAAGGAGATTTTCCTTCGGGAACTTATTAGCAATTCTTCTGATGCAT
TGGATAAGATCCGATTCGAGAGCTTGACGGACAAGAGCAAGCTCGATGCTCAACCTGAGC
TCTTCATTCGTCTTGTTCCTGATAAGGCGAACAAGACACTATCCATTATTGATAGCGGTA
TCGGCATGACCAAAGCAGATCTGGTCAACAATCTGGGTACGATTGCAAGGTCCGGCACCA
AGGAATTTATGGAAGCCTTGCAGGCTGGTGCTGATGTGAGCATGATCGGTCAATTTGGTG
TTGGTTTCTATTCTGCTTACCTTGTAGCAGAGAAGGTTATTGTGACCACCAAACACAACG
ATGATGAGCAGTATGTCTGGGAATCACAAGCCGGTGGTTCATTCACTGTTACGAGGGATG
TCAATGGAGAGCAATTGGGCAGAGGAACTAAAATAACTCTCTTCCTCAAGGAGGACCAGC
TGGAGTACTTGGAAGAAAGGAGAATCAAGGACCTCGTAAAGAAGCACTCTGAATTCATTA
GCTACCCTATTTACCTCTGGACAGAGAAGACTACTGAGAAAGAAATCAGTGATGATGAAG
ATGATGAGCCCAAGAAAGACGAGGAGGGTGCGGTTGAGGAGGTTGATGAGGACAAAGAGA
AGGAGAAAGGCAAGAAGAAGAAGATTAAGGAGGTTTCTTACGAGTGGCAGCTCATTAACA
AGCAGAAACCTATCTGGTTGCGCAAACCGGAGGAGATTACAAAGGAGGAGTATGCCTCCT
TCTACAAGAGCTTGACCAATGACTGGGAGGATCACCTTGCTGTAAAACACTTCTCTGTTG
AGGGGCAGCTTGAGTTCAAGGCGATCCTCTTTGTGCCCAAGAGAGCTCCATTTGATCTTT
TTGACAGCCGGAAAAAGATGAACAACATCAAGCTCTATGTCAGGAGGGTGTTCATTATGG
ATAACTGTGAGGAACTTATGCCTGAGTACCTTGGGTTTGTGAAAGGTGTTGTGGACTCCG
ATGATTTACCTCTCAACATCTCTCGTGAGATGCTGCAACAGAACAAGATTCTCAAGGTGA
TTAGGAAGAACCTGGTGAAGAAATGTATTGAGATGTTCAATGAGATTGCTGAGAACAAGG
AGGACTATAACAAGTTCTATGAGGCATTCTCAAAGAACTTGAAGTTGGGCATTCACGAAG
ACAGCCAGAACCGAGCCAAGTTGGCTGACCTCCTCCGTTACCACTCTACCAAGAGTGGTG
ATGAGCTGACCAGCCTGAAGGATTATGTTACTAGGATGAAGGAGGGCCAGAAAGACATCT
ACTATATTACTGGAGAGAGCAAGAAGGCAGTTGAGAACTCTCCGTTCTTGGAGCGTCTCA
AGAAAAAAGGATATGAAGTGCTCTATATGGTTGATGCTATTGATGAATACGCCGTGGGGC
AGCTGAAAGAATATGATGGTAAGAAACTGGTCTCTGCCACCAAGGAGGGATTGAAGCTCG
ATGATGACAGTGAAGAAGAGAAGAAGAAAAAGGAGGAGAAGAAGAAGTCTTTTGAGAATC
TCTGCAAGATAATTAAAGACATTCTTGGTGACAAGGTTGAGAAGGTGGTTGTTTCTGATA
GGATTGTTGATTCTCCATGTTGCTTGGTGACTGGTGAATACGGTTGGACAGCCAACATGG
AAAGGATCATGAAGGCTCAGGCATTGAGGGATACCAGCATGAGTTCATACATGTCCAGCA
AGAAGACAATGGAAATTAATCCTGATAATGGAATCATGGAGGAATTGAGGAAGAGAGCTG
AGGCAGACCAAAATGACAAATCAGTGAAGGATCTCGTGTTGTTGCTCTTTGAGACAGCTC
TACTAACATCTGGTTTTAGCCTTGATGACCCTAATACCTTTGCCGCAAGAATTCACAGGA
TGTTGAAGTTGGGTCTTAGCATAGAAGAGGAAGAAGAAGGAGCTGGTGAAGATGCCGACA
TGCCTGCACTGGAGGAAATTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAATCATTGA
AATCAGTTGAGACTTTTGAGATGCGTGAAAATACAATTTGAGTGTGTTCCATTTTTCTTA
TCTTGTGTGTATGGTTTCTTTTTGGCTAGTGGTTCGGATGGGTCAGTTGAGTCTGTTGTG
TAAGTAACTGTGTTTTTGTGTCCTGTCCAAGTGTTAAGAGAATATGTCCATCCGTTTTCT
GAAATGTTATGAAGTTCTATTTTGATCACATTGATTTTCCCTTTTCTCATTCGATTCTAC
TCTTTTACAGTATATATAATCCAACCTGTTAGTCTTCAAAAAATTCTAGAGGAACATAAC
GTTGGATTAAGAAATTGTATTAGTTGGTGAGTTGGGTAGAGGGGAAAGTTCCTGCAATCA
ATCGTGACATAGTATGGATTCTTCTAAGCTGATTCCGCCTCTTATCTATCTT
