Microarray Probes on PGSC0003DMT400024385
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46709_PI426222305 |
JHI_St_60k_v1 |
GTCTTGTCCTGAAGATGTAGATGAGTTTTGTACTCAGTTGGATGCATCTCCACACCAAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024385
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024385 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G14130.1 |
+3 |
2e-115 |
343 |
174/295 (59%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:4836041-4837040 REVERSE LENGTH=308 |
Transcript Sequence (1196 bp)
>PGSC0003DMT400024385 1196 pgsc_dm_v3.4
GAATAAACCCCAAGTTCCAAAAAAAGAAAAAAACCAAGGTAAGAGCAAAAAACAAAAACA
AAATGGAGACTGAAAATTCAGTGCCAGTAATTGATTTACAGGATTTTCCAAGGCAATCAT
CCAAGTTGATATGGGCTTGTGAAGAATGGGGTTGTTTCAGAATTTTGAACCATGATAACA
TTCTTCCAGTTTCACTCATGGCAGAGATGAAGGAAGTGGTGAGGACATTGTTTGATCTTC
CAACTGAAATCAAGAAACGCAACAAGGATGTAATTGCAGGATCTGGGTACATGGCTCCTA
GTGAAAAAAACCCTCTTTATGAAGCTTTGGGTCTCTATGATATGTCTTGTCCTGAAGATG
TAGATGAGTTTTGTACTCAGTTGGATGCATCTCCACACCAAAGAGAGACAATCAAGAAGT
ATGCTGCAGCAATTAATGGACTAATGATGGACATTCTGCGAAAGATGAGTGAAGGGTTGG
GACTGCCAAATGTTTCCTTTGAGGATTGGCCTTGTCAGTTTAGGATTAACAAGTACCACT
TCACCCCAGAAGCTGTAGGTTCCTCTGGGGTTCAGATACACACAGACTCAGGATTCCTTA
CTATTCTACAGGATGATGAAAGCGTTAGCGGTCTTGAGGTCATGAAGAAGTCTGGTGAAT
TTGTAGCAGTTGATCCTTGGCCAAACACCCTCCTTGTGAATCTTGGAGACATAGGCACGG
TATGGAGCAATGGAAGATTACACACAGTCAAGCATAGAGTGATATGCAAGGAAGCAAAAC
AACGGGTGTCTATTGCTTCATTCCTCTTGGGACCAAGGGACACAGCAGTGGAACCACCAC
CTGAGCTGGTAGATGCTGAACACCCCCGTATCTATGTTCCTTTCACTTTCACTGATTATA
GAAAGCTCCGTTTATCAACAAAGTTGCAGGCGGGGGAAACTCTTGATCTTATGCGCACTA
ACTTGTAAAACTTTGGCAAGCATCTCAGGTCCTCCGTTATATTGATTTACAGAAATGATC
TTGAAAGTAGATAAATCTTAGTGGAATTTCATCTACTATATATTGTCAACGATCTAATAC
TACAATAGCCTATAAAATGGCAGAGCATTTATGCATATCAACAAAGCATCTATGATCCAT
CTTTGTATTGTGTTCTTCTGTTATCTATTGCTTTTATAAGAATTGATCAGTTCTTA
