Microarray Probes on PGSC0003DMT400024046
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24927_PI426222305 |
JHI_St_60k_v1 |
GCTGACATTTTGAGAACTGTATATTGACATACTTAAGTAGGTTAATGTCTCCTCTGTAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024046
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024046 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G21295.1 |
+1 |
5e-10 |
61 |
66/272 (24%) |
Tudor/PWWP/MBT superfamily protein | chr3:7489635-7492296 FORWARD LENGTH=645 |
Transcript Sequence (1142 bp)
>PGSC0003DMT400024046 1142 pgsc_dm_v3.4
CTCAGAATGATGCTGCTTAATAGAAGAGCACTACAAATGTCTAGAGTAGTTTCACGACCA
AGCAATTGATTGGATACTGTTTGCTGTGCTGTTTTGATCTGTTCTGAAAATTCAGGTAAC
AATGCATTGCGACCAACGAAGATGAACTTCAAAGTCATCAGTCGTCCAGCAGTCAACAAA
TGGAAGCACAATGGGAAAGTGCATAATCAACATTTTAAGAGCAGATCAGTTGTTTCAACT
AATGAAAGAAGTACTGAATTTGGATCTAAGACTGAATCATTTGAAATCATGTCAAGGGAT
GTCAATCGGAAGTCTCAGCTTAGTCCAGGAAACAGTTTCACAGAGGACACCAGCATCCAA
AGCCTTAGTTCAAAGTTCACCACGCGGAAGAATAGTACCAAGACATTAATAGATGTGCAT
ATGACAGTTCAAAGCACTTATAGAGGAGAGCATACTCCCCTTGTTTCCTTAATGAGTAGA
TTAAATGGAAAGACAATCGTCGGGCACCCCATCAACATAGAAGTATTATATGATAGCTCA
ATGCTTCCTGTTGAAAAGGAGAGCTCTGATCAACTGCAAAACAAAGGCAGAATGCCTCAA
CTTGTTTGGAGAACTTCAAAGAGAACTCCCGTCTGTTACACAAGCTCTACCTCTTCTGCA
ACTAAGTATGAGAACCTTCAGCACAGCAGCAACAAACTTGGAGATTTAAGTTCCCAAGCT
AGGAAAAATAGTCCATTTAATACTGAGTCTCGTGGGAAGTTATCGAAGAAGCCAAACATG
TCAAAGAATAAACCAAGATCACTCTACCTTGCTGATTCCAGAATCAAGAATGCTGTAAAA
GATACATGTGTCCCTGTGAAAGACATATTCATCAAGTTAATAGGGGCACTTGGAAATGTA
TGATCTTAAGCAAGAGGTGTTCATATATATGGTGTATTTATTACCCTTTATGACTTTTTA
AGTAGGAGAAGCTTTCTATAGATATTACAGTTTGCTTAGTTTTTTCGTTCTAACTGCTGA
CATTTTGAGAACTGTATATTGACATACTTAAGTAGGTTAATGTCTCCTCTGTAAGTATCC
TTTTTAACTTACAAAAAATGAGCAAAATGATTGCTCAGTCTTATGTTCTTCTAATATGAA
AT
